Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2280 ATGGCGGATTCCGCCTCTTCTCCTGCTATCTCAGAAGCTAACCCGAAACAGTCCGATTCGGGTGCTCCTAATTCCCATCAGAACCAACCCGATCCCGTTCCTGCCTCCGCACCGCCAGCGATTCAGCCACCATCATCTTCTGCGCCGGTCGTTGCAGTAAACCCTATCGCGAACCCATCATTGGTAAGTACGCCAGCGCCTCCTGCTATTTCACATGCGGCGGCGGGGGCGGCACCGCAAGTATCAGGCGCAGCCGTTGTCCCTCCGGCCGTGCCGTCCTTCAGGCCGGTGGCTCCACAGACTCCTCAGTTTTCTCCCATACCTAATCCCCTTAATTATCAAAACCCCGCTGTTCAGCCGCCTGGTGTAGGCTCTGCCTCCGCAATGACTCCTGGCGTGCCTAGTGCTACTGGAGCGGTTCCAGTGTCCGTGCCGCAAGTGCCGGGGCAGTTACAGCCGATGATGATGCCTTATCAGATTCCCCCTGGCCAGCCTCCTAATCCGGCCTTGAGACACTATGCACCGATGCCTAATGGATATACAGCCATTCCAGGAGCTCCGCAAGGGACCATGCCTCCCCCGGGAATGCCTCGTTACCCTCCTCCTTATGGAACTATGGTTCGTCCTTCATATCCTCCACGCCCTCCTGGAGCTGTTAATGTACTTCCAGCTGTATCACGCCCTCCTGTTGCAGGGATCCCTCCAGTTCGCCCTATCATTCCCCCTGTGGTTAGACCAATGGCTGCTCCTAGTGTTACTCCAGCTGAGGAGCCACAAACTACAGTTTATATTGGAAAGATTGCACCAACAGTGGAAAATGAGTTTATGCTTTCACTGCTTCAGTTATGTGGACCTATCAAGAGTTGGAAACGTCCTCAAAATCCATCAAATGGAACTCCTAAAGGCTTTGGGTTTTCGGAGTTTGAGTCTGCTGATGGGGTCCTTCGTGCCTTGCGTCTGCTTAGTAAATTGAATGTTGATGGGCAAGAATTAACGGTCAAGGCTAATGATGCTACAAAAGAATATCTGGAGCGTTATGTTAAGAAAAAAACTGAGAACTCAAAGAACAAAGATGTCCAGGCTGTTGGATCTGAAAAAGACAATGAGAGTGCACAACCACCTAATACAAATGAGGATGGGAAATCTGATGCTGAGCACACAACGAAAGAGGACAATAATTCAGGGAACAAGGAAAGTCATGATTGGACAAACTTCGGCATTGTTACTGATGAAGACAGGGAAGCTGATCGGGTGGCTTTAGAGAAGATTACAAACATGATAGAGGAGAGGTTGAAGACGAGACCACTGCCTCCACCTCCTGCACAGGCAAGAGATGGGGACTCTACAAATTTAACTTCGGAACATTCTGCAAAAGCAAGAGATGGGGACTCTGATGCAGATATCGTGAATCATGAAGTAGCCGAAGATAAAAATGACAGGGCAACAAATAGTGACAGCAAACCAACCAGTGAGCATGATAGGCCTGAGACCCCTGATAGAAGGCATGATAGGAGGAGCAAAGAGAGAGACCGAGATAGGGAACTAAAACGAGAAAAGGAAAGGGAACTCGAAAGATATGAAAGAGAAGCAGAGCGGGAACGCATAAGGAAAGAGAGGGAACAAAGGAGGAGGATTGAGGAGGCTGAGCGTCAGTATGAAGCATGTTTGAAGGATTGGGAGTATAGAGAAAGAGAGAAAGAGAAAGAACGCCAGTATGAAAAGGAGAAGGAGAAAGAAAGGGAGCGCAAAAGGAGAAAGGAGATACTATATGATGAAGAGGATGATGATGATGATTCAAGGAAGCGGTGGCGTAGAAGTGTGTTAGAGGAAAAGAGAAAGAAAAGATTGCGTGAAAAGGAAGATGACCTGGCCGACAGACTAAAAGAAGTAGAAGAAATTGCTGAGGCCAAGAGGAAGGCTGAGGAGGATCAGCAACAGAAGCAGCAGAGAGATGCTCTGAGGCTACTATCTGACCATGTGATGAATGCTGGTGAAAAAAGTATGGCTACTGAAGATATTACTAATGAAGTCAAAAGTATTGTTACTGAGCAAAACACTATAGCTGACTACAGTTATGAAGGCCCCACAGGTGATGGTAATCCACTAAATGGCATCAATGATGAATCAACCATGGCATCAGTTGCTGCAACTGATGCACGGCAAAGTGGCAATGCCCCTGCAAAGAAGCTGGGTTTTGGTCTGGTTGGCTCTGGGAAAAGAACAACTGTCCCTTCTGTATTCCATGAGGAGGAGGATGACGATGCACACAAGGATAAAAAGCTGAGGCCTCTTGTTCCCATTGATTATTCAACTGAGGAACTGCAGGCTGTTCAACCTTCTGGTTCTGGGGCCCCACCTCCGAATTTGGCTGCAGCTGCAGAATTTGCCAAGCGTTTATCCAATGCCAATATCAAGGAAGAGAAGTTAGATGGAGAACGGGATAGAAGTAGACGTTCTAATGAGAAGTCTAACCACCGGGACAGGGACAGGAATGATGAAGATGGCACTCGCAAAGATGAAAGCAGGGAAAAGATTTCTGATCGTGACAGGGATCGAGATCGTGGGTTGGAGAAACCGAAGACATCAGATAACAAAAAGCTACTGGATGCAAAACAGTTGATTGATATGATACCGAAGACCAAGGAGGAGCTGTTCTCATATGAGATAAACTGGGCAGTTTATGACAAGCATCAGTTGCATGAAAGAATGAGACCATGGATATCAAAGAAGATTACCGAGTTCTTAGGGGAAGAAGAAGCTACATTGGTAGATTATATTGTTTCAAGTACGCAGGAACATGTGAAAGCATCCCAGATGCTGGAGCTGCTTCAGTCCATTTTAGATGACGAAGCTGAAATGTTTGTTCTCAAGATGTGGAGGATGCTTATTTTTGAAATAAAGAAGGTAGAAACAGGCCTAGCTTTGAGGTCAAAATCATGA 2940 0.4731 MADSASSPAISEANPKQSDSGAPNSHQNQPDPVPASAPPAIQPPSSSAPVVAVNPIANPSLVSTPAPPAISHAAAGAAPQVSGAAVVPPAVPSFRPVAPQTPQFSPIPNPLNYQNPAVQPPGVGSASAMTPGVPSATGAVPVSVPQVPGQLQPMMMPYQIPPGQPPNPALRHYAPMPNGYTAIPGAPQGTMPPPGMPRYPPPYGTMVRPSYPPRPPGAVNVLPAVSRPPVAGIPPVRPIIPPVVRPMAAPSVTPAEEPQTTVYIGKIAPTVENEFMLSLLQLCGPIKSWKRPQNPSNGTPKGFGFSEFESADGVLRALRLLSKLNVDGQELTVKANDATKEYLERYVKKKTENSKNKDVQAVGSEKDNESAQPPNTNEDGKSDAEHTTKEDNNSGNKESHDWTNFGIVTDEDREADRVALEKITNMIEERLKTRPLPPPPAQARDGDSTNLTSEHSAKARDGDSDADIVNHEVAEDKNDRATNSDSKPTSEHDRPETPDRRHDRRSKERDRDRELKREKERELERYEREAERERIRKEREQRRRIEEAERQYEACLKDWEYREREKEKERQYEKEKEKERERKRRKEILYDEEDDDDDSRKRWRRSVLEEKRKKRLREKEDDLADRLKEVEEIAEAKRKAEEDQQQKQQRDALRLLSDHVMNAGEKSMATEDITNEVKSIVTEQNTIADYSYEGPTGDGNPLNGINDESTMASVAATDARQSGNAPAKKLGFGLVGSGKRTTVPSVFHEEEDDDAHKDKKLRPLVPIDYSTEELQAVQPSGSGAPPPNLAAAAEFAKRLSNANIKEEKLDGERDRSRRSNEKSNHRDRDRNDEDGTRKDESREKISDRDRDRDRGLEKPKTSDNKKLLDAKQLIDMIPKTKEELFSYEINWAVYDKHQLHERMRPWISKKITEFLGEEEATLVDYIVSSTQEHVKASQMLELLQSILDDEAEMFVLKMWRMLIFEIKKVETGLALRSKS 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2280 979 MobiDBLite consensus disorder prediction 563 601 - -
Bisa11g2280 979 Gene3D PWI domain 858 974 - -
Bisa11g2280 979 Pfam PWI domain 902 965 IPR002483 GO:0006397
Bisa11g2280 979 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 1 979 - -
Bisa11g2280 979 CDD RRM_RBM25 260 343 IPR034268 -
Bisa11g2280 979 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 262 331 IPR000504 GO:0003723
Bisa11g2280 979 Coils Coil 509 558 - -
Bisa11g2280 979 Coils Coil 613 650 - -
Bisa11g2280 979 Gene3D - 253 370 IPR012677 -
Bisa11g2280 979 MobiDBLite consensus disorder prediction 379 397 - -
Bisa11g2280 979 MobiDBLite consensus disorder prediction 454 547 - -
Bisa11g2280 979 ProSiteProfiles PWI domain profile. 882 979 IPR002483 GO:0006397
Bisa11g2280 979 MobiDBLite consensus disorder prediction 744 766 - -
Bisa11g2280 979 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 260 338 IPR000504 GO:0003723
Bisa11g2280 979 FunFam RNA Binding Motif protein homolog 858 974 - -
Bisa11g2280 979 SMART pwi_2 895 968 IPR002483 GO:0006397
Bisa11g2280 979 SMART rrm1_1 261 334 IPR000504 GO:0003723
Bisa11g2280 979 MobiDBLite consensus disorder prediction 802 864 - -
Bisa11g2280 979 Coils Coil 561 589 - -
Bisa11g2280 979 MobiDBLite consensus disorder prediction 715 789 - -
Bisa11g2280 979 SUPERFAMILY PWI domain 900 967 IPR036483 GO:0006397
Bisa11g2280 979 MobiDBLite consensus disorder prediction 1 51 - -
Bisa11g2280 979 MobiDBLite consensus disorder prediction 426 547 - -
Bisa11g2280 979 MobiDBLite consensus disorder prediction 1 31 - -
Bisa11g2280 979 SUPERFAMILY RNA-binding domain, RBD 233 335 IPR035979 GO:0003676
Bisa11g2280 979 MobiDBLite consensus disorder prediction 352 414 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g2280 11 46858211 46863893 Bisa11g2280 11 46858211 46863893 ECH