Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2258 ATGTTGGGGGCCAACAACGGAAATCCTGTTCTTCCTGTTTTCTTGGACGAGACTCAATTTCAGTATCAAACTAATGCAGCAAATCAGCTGCAGTTGTTTGGAAACTTACAAGCTGGATGTAGTGTTGATCCGGTTAATTACTTCGGAAATGAGCATATTAGTTCCATGATTCGGCCAAACAAACGAAGCAGGGAGATGGAAGATATGTCAAAGCAGCAAAGGCTTCAGATTTCCTTAAATTACAATGTCTGTCAAGATGAACCTGATCAATCAGCAAGCATTCCAAACCGAAACTCAAACCCAAACCCTGTTTCAACTGGATTGAGGCTTTCTTATGATGATGATGAGCGTAACTCCTCTGTTACTTCTGCAAGTGGCAGCATGACTGGTGCACCTTCAATCATATTATCCCTTGGTGACAATATTAGAACTGAGCTTGATGGGCAGAAGGAAGAGTTGGACCAGTATATTAAACTTCAGAAGGAACAACTGTCAAAAGGAGTGAGAGACATAAAGCAAAAGCATATGGCTTCTCTCCTTGCTGCCATTGAGAAAGGTGTAAGCAAGAAGCTAAGGGAAAAAGATGTGGAGATAGAGAACATGAACCGTAAAAACCGAGAGCTAGCAGAGAGAATAAAGCAGGTGGCTATTGAAGCGCAAAACTGGCATTACAGAGCGAAGTACAATGAGTCAATTGTGAATGTTCTAAAGAACAATCTCCAGCAGGCAATCTCCCAGGGAGTTGAACAGGGGAAGGAAGGGTTTGGAGACAGTGAGGTTGATGATGCTGCCTCATACATTGACCCCAATAACTTGCTCAGCATCCATGGCGTGCCTACTAAATCTAGTAGCAAGAAGCAAGCCATGGAGGAGCACATGATTTGCAGAGCATGCAAGGCGAAGGAGGTTTCAATGTTGTTGATGCCTTGTAGGCACCTGTGCTTGTGTAAGGACTGTGATGGATTTGTCAATGTTTGTCCTGTTTGCCAAATGATAAAATCTGCGAGTGTCCAAGTGTATCTGTCTTAA 1029 0.4315 MLGANNGNPVLPVFLDETQFQYQTNAANQLQLFGNLQAGCSVDPVNYFGNEHISSMIRPNKRSREMEDMSKQQRLQISLNYNVCQDEPDQSASIPNRNSNPNPVSTGLRLSYDDDERNSSVTSASGSMTGAPSIILSLGDNIRTELDGQKEELDQYIKLQKEQLSKGVRDIKQKHMASLLAAIEKGVSKKLREKDVEIENMNRKNRELAERIKQVAIEAQNWHYRAKYNESIVNVLKNNLQQAISQGVEQGKEGFGDSEVDDAASYIDPNNLLSIHGVPTKSSSKKQAMEEHMICRACKAKEVSMLLMPCRHLCLCKDCDGFVNVCPVCQMIKSASVQVYLS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2258 342 Coils Coil 191 218 - -
Bisa11g2258 342 PIRSF SBP1_RNase_bind 1 342 IPR017066 -
Bisa11g2258 342 ProSiteProfiles Zinc finger RING-type profile. 295 330 IPR001841 -
Bisa11g2258 342 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 277 341 - -
Bisa11g2258 342 Pfam Zinc finger, C3HC4 type (RING finger) 293 330 - -
Bisa11g2258 342 MobiDBLite consensus disorder prediction 86 107 - -
Bisa11g2258 342 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 279 342 IPR013083 -
Bisa11g2258 342 CDD mRING-HC-C3HC5_CGRF1-like 294 329 - -
Bisa11g2258 342 MobiDBLite consensus disorder prediction 86 127 - -
Bisa11g2258 342 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 49 339 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2258 Bisa-ChrBisa11 46547432 46550628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2258 294 330 Miscellaneous Gene Families AT2G21380 43.243 1.24e-07 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g2258 11 46547432 46550628 Bisa11g2258 11 46547432 46550628 ECH