Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2243 ATGAAGGGAAACAGAAGGTGTTCTCTACTCTTTTTCCTGCTCTTATTGATCATTGTCTTTGTCACTTCTTCTGTCATTTCTGTGGAGGCAAGGAAGAGTCACTCCAAGAAAACAAAATCTCATAAACATAAAAAAAATTACAGCCATGGCCGCGCTTATTCCCCAAGTCCTGCCCTAGCTCCAGCCAAAACGACTGCTTTTGACATTATGTCCTTCGGAGCCCAAGGAAATGGAGTTTCCGATGATTCGAAGGCACTTAAAGCAGCATGGAAAGCTGCTTGCAAAGTTGGTGGTGCTACTGTGAAAATTCCAGCAAAACTCAGGTTCCTCATCAACCCAATCACTTTACAAGGCCCTTGCATGCCTGTTACTCTTCAGATAGATGGAACTGTATTGGCTCCTGCTGAAGCTTATTCGTGGCCAAAATCGAGTTTATTTCAGTGGATAAATATCAAATGGGTCCAAAACTTCACCATCCGAGGCTCTGGCACCATTGATGGCCAAGGCTCTAAGTGGTGGTCCTTCTCACAAATTTATCAGATGCAGAAGAGATATTCCAAACGAATTCCAGGCATGAAACCAACTGCTATAAGATTCTATTCCAGCAACGATGTGACAGTTCGTGACATCAAAATCATAAACAGTCCTCTGTGCCATATAAAATTCGACAATTCAAAAGGGATCAAAGTTAATGACATTACAATTTCTTCCCCAGAAAACAGCCCGAACACTGATGGAATACACTTGCAGAACACACAGGATGTAGAAATTCAACATTCTGATATTGGAAGTGGAGATGACTGTGTATCCATCCAAACTGGTTGCTCAAACATTCATATTCACCACATTAACTGTGGTCCAGGACATGGTGTAAGCTTGGGAGGATTAGGAAAAGACAAAAGCGTGGCATGTGTTTCTAACATCATGGTTAACGATGTCTCAATGCAGAACACTCTATATGGAGTGAGGATCAAAACCTGGCAGGGTGGGATTGGGATGGTGAAGAATGTATCATTCTCAAGAATCCAAGTGCAGGATGTGAAGGTTCCAATAATGATAGATCAATACTACTGTGACAAGCATGTGTGCAAGAACCAGACAGGAACAGTGGTGATAAGTGGAGTTAAGTTCAATCAAATTTCTGGGAGTTATGCAGTTCAACCCATACATCTAGCTTGTAGCAATTCCATACCATGCACTGACGTCGATCTAAGTGATATTGAGCTTAGGCCTTCTGGTAATTATAGAGGTTATCAACAAGCTGCTTTGTGTTGGAACTCTTATGGGAAATCACAAGCCCCATTGCTTCCTTCAGCCATTGATTACTGCTTGAGAAGTGGTGGGGGTTATATCAAGAGGATAGCTAGGTCACACCCACGTGACAGTGTGTGTTACTAA 1398 0.4227 MKGNRRCSLLFFLLLLIIVFVTSSVISVEARKSHSKKTKSHKHKKNYSHGRAYSPSPALAPAKTTAFDIMSFGAQGNGVSDDSKALKAAWKAACKVGGATVKIPAKLRFLINPITLQGPCMPVTLQIDGTVLAPAEAYSWPKSSLFQWINIKWVQNFTIRGSGTIDGQGSKWWSFSQIYQMQKRYSKRIPGMKPTAIRFYSSNDVTVRDIKIINSPLCHIKFDNSKGIKVNDITISSPENSPNTDGIHLQNTQDVEIQHSDIGSGDDCVSIQTGCSNIHIHHINCGPGHGVSLGGLGKDKSVACVSNIMVNDVSMQNTLYGVRIKTWQGGIGMVKNVSFSRIQVQDVKVPIMIDQYYCDKHVCKNQTGTVVISGVKFNQISGSYAVQPIHLACSNSIPCTDVDLSDIELRPSGNYRGYQQAALCWNSYGKSQAPLLPSAIDYCLRSGGGYIKRIARSHPRDSVCY 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2243 465 Pfam Glycosyl hydrolases family 28 99 412 IPR000743 GO:0004650|GO:0005975
Bisa11g2243 465 FunFam polygalacturonase At1g48100 56 446 - -
Bisa11g2243 465 SUPERFAMILY Pectin lyase-like 57 438 IPR011050 -
Bisa11g2243 465 MobiDBLite consensus disorder prediction 34 49 - -
Bisa11g2243 465 MobiDBLite consensus disorder prediction 32 53 - -
Bisa11g2243 465 SMART pbh1 334 355 IPR006626 -
Bisa11g2243 465 SMART pbh1 225 251 IPR006626 -
Bisa11g2243 465 SMART pbh1 252 273 IPR006626 -
Bisa11g2243 465 SMART pbh1 305 326 IPR006626 -
Bisa11g2243 465 Gene3D - 53 442 IPR012334 -
Bisa11g2243 465 PANTHER - 65 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2243 Bisa-ChrBisa11 46306337 46310388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2243 1 464 Glycoside Hydrolase AT3G26610 63.425 0.0 603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g2243 11 46306337 46310388 Bisa11g2243 11 46306337 46310388 ECH