Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2093 ATGTTCATGTCGATAATATGTTTAGCTGAGTCCTCTTTTCTCTGCAGCAAAGTGCTCTCTTACAAACAACGTTTATTGAGATTATACCATGCTGCTTCTTCGGCGTTGATGTTAGAAGACCACGTGTTTGACGAAAGTCCAAGAGTTGGTTACGCCAATGTAATGGTCAATTTTGGAAAAAATAGGTTGAGAGTTTCAAGACTTAGAAGGAAGCGCAAGTTATTTCTTATAGTGGTCAAGGTGATTAAATCCTTGGATTGTGAGGTTGCACTTGCAAGAGATAAAATGTTCTGGAAAGCTGTAAGGAGGTATGGATTTTTTCATTCAATTAGTTCCTTTAGAACTATCATTCACATATATGCATCGGCAGGGATGCATATGGAAGTATTTGCTCTACTTAGAGATATTGTTGGATTCTATAGGAAGGCCAAGTTGGATACATTCATGTTGTTTTCAACTTTGCTAGATTCACCTCACCATGTGGAAAGATCAATTGTTGTGTTTAACATACTCATAAAAGTACTTGCATCTTTTTCCATGCTTGACGATGCATTTGATGTGTATATGAGAGTTAAATATTTTGGGCTTGAACCTGATATATTTTCATGCAATTTCTTGTTGAAATGCTCAGTAGAAGTGAAGAGAGTGGAGTTGGTTAAAAAATTATTTGAGGAGCTAAAAATCTCTGGTCCATCACCAAATATCTACACCTATACAATTATGATGAACTTTTACTGTAGGGGAGATCTTGGGCAGAAAGTAGATATTAACCAAGCTACTGGGATTTTAGGAGAAATATGGAGGAGTGGGGAAAACCCAACTGCTATCACTTGGAGTATTTATATTCATGGACTTTGTAAACTTGGCTCTCTTGATGTTGCTCTGCAGTTAATTCATGAGTTGAACTTGAGGTATAGAAACCAGCCTCTCAATAGCTATTGTTTCAATGCTGTAATTTATGGATTTTGTCAAAGGGGTGCGGTTCATGAAGCCTTGCAGGTTTTGGATGAAATGCGGAGCTCTGGAATATTGCCTGATGTTTGTAGCTACAGTATTTTAATTCATGCATTTTGCAAGAAAGGGGATGTAGAGAAAGGTTTTGACTTGATAGAGGAAATGGAACTTTATAATATAAAACCATCCATAATTACCTACACCTCCCTTATCCATGGTCTATGCAAGAGTAAGCTGATGGAATATTCAATTTATATCTTTCAGAATATTGGTGCTTCTGGTTACAAATATGATCAGACTACTTATGAGACTTTGATTGATGGATTTTGCTATCAAGGTGATATGGATTCAGCCAGCAAGCTTTTGGACGAGATGCTCAGAAATAATTTGGCTCCTACTTCTTTTAGTTGCCATAGTCTAATTGGAGGATTCTACAAATTGGGACTCTTAGACAAGGCATTGGAAGTTTTAAATTTCATGCTACAGGCTGGTGTCTTGCCAAATACCATCACTTGCAATTTTATTATCGATGGACTCTGCAGGGAAGGTCAGTTCATGGAAGCCTTGACACTGTTGGAAGAGTTCCAAGACCGAGGAATTGACCTAAACTCACTTTCATATAATGTAATCATCTACAGGCTGTGCAAGGAAAGACATCCAGAAAGGGTATGGGAGCTCTTTCCAAGAATGCTTAAAAGGAATATAGTTCCTGGAGTTGTTACTTATACTACTCTTATAGATGGTTTTGCAAAACAGTCTAATCTAAAGAATGCCTTGGTTTTGTTCACAAAAATGCTAAAAATTGGAGTCAGTCCCAACACCATTACATATACAGTCCTTTTTAACATGTTTTGCCATGGGGGCCACATGCATGAAGCATATGGCATTTTTAAGGAAATGATGATGAATGGTTTAGATCCGGATCATATTTCATATACATCTTTAATAACTGGCTTTTGTCGCATAAGAGATATGAGAAAGGCCTGGGCCATATTCCAAGAAATGTTGAGGAAAGGTCTTTTGCCTGATGTAATTACTTACACATGTTTGATGGATGGATTTTGCAAGTTAAACCGGATAGATATTGCCTCTCTTCTATTTGATGATATGAACAGATATGCAGTTACTCCGAATGTTGTAACTTACACTGTTCTCATTGCTTGGTACCGTAAACATGGACACATTGATCGGGCACACGAGTTATATCATGAAATGAAGGTTAAGGGTATTTTACCAGATGACATTACTCATAAAGTTCTAAGTCCGAAAGCTGGCGGGAGCAGAAGAAAAGGAAAGCAAGCTTCACTCTCACTTTGGCGTATCTTATCTTCAGCCTGCATTGCTATGATCTTGGAAGTTGGACCAGAAGAATTGGCAATGTACACTGCAGGCAAAGCTGAAGATTTCCCATTGGAACTCAGGTCACCTCTTCCTGCTTGCCTTGAATGTATCCTGAGGAAGCTGAGCCTCCAAGAAGCTCTGGTAGGAAATGATATCCAAGAAGTGGATGTGGATGGAGTGACAATTGACAATTTATCTAGCTAA 2499 0.3818 MFMSIICLAESSFLCSKVLSYKQRLLRLYHAASSALMLEDHVFDESPRVGYANVMVNFGKNRLRVSRLRRKRKLFLIVVKVIKSLDCEVALARDKMFWKAVRRYGFFHSISSFRTIIHIYASAGMHMEVFALLRDIVGFYRKAKLDTFMLFSTLLDSPHHVERSIVVFNILIKVLASFSMLDDAFDVYMRVKYFGLEPDIFSCNFLLKCSVEVKRVELVKKLFEELKISGPSPNIYTYTIMMNFYCRGDLGQKVDINQATGILGEIWRSGENPTAITWSIYIHGLCKLGSLDVALQLIHELNLRYRNQPLNSYCFNAVIYGFCQRGAVHEALQVLDEMRSSGILPDVCSYSILIHAFCKKGDVEKGFDLIEEMELYNIKPSIITYTSLIHGLCKSKLMEYSIYIFQNIGASGYKYDQTTYETLIDGFCYQGDMDSASKLLDEMLRNNLAPTSFSCHSLIGGFYKLGLLDKALEVLNFMLQAGVLPNTITCNFIIDGLCREGQFMEALTLLEEFQDRGIDLNSLSYNVIIYRLCKERHPERVWELFPRMLKRNIVPGVVTYTTLIDGFAKQSNLKNALVLFTKMLKIGVSPNTITYTVLFNMFCHGGHMHEAYGIFKEMMMNGLDPDHISYTSLITGFCRIRDMRKAWAIFQEMLRKGLLPDVITYTCLMDGFCKLNRIDIASLLFDDMNRYAVTPNVVTYTVLIAWYRKHGHIDRAHELYHEMKVKGILPDDITHKVLSPKAGGSRRKGKQASLSLWRILSSACIAMILEVGPEELAMYTAGKAEDFPLELRSPLPACLECILRKLSLQEALVGNDIQEVDVDGVTIDNLSS 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2093 832 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 521 555 IPR002885 -
Bisa11g2093 832 Pfam PPR repeat 412 443 IPR002885 -
Bisa11g2093 832 Pfam PPR repeat 310 339 IPR002885 -
Bisa11g2093 832 Pfam PPR repeat family 625 674 IPR002885 -
Bisa11g2093 832 Pfam PPR repeat family 555 604 IPR002885 -
Bisa11g2093 832 Pfam PPR repeat family 198 247 IPR002885 -
Bisa11g2093 832 Pfam PPR repeat family 345 394 IPR002885 -
Bisa11g2093 832 Pfam PPR repeat family 695 738 IPR002885 -
Bisa11g2093 832 Pfam PPR repeat family 485 534 IPR002885 -
Bisa11g2093 832 Gene3D Tetratricopeptide repeat domain 375 446 IPR011990 GO:0005515
Bisa11g2093 832 Gene3D Tetratricopeptide repeat domain 619 691 IPR011990 GO:0005515
Bisa11g2093 832 Gene3D Tetratricopeptide repeat domain 692 739 IPR011990 GO:0005515
Bisa11g2093 832 Gene3D Tetratricopeptide repeat domain 447 515 IPR011990 GO:0005515
Bisa11g2093 832 Gene3D Tetratricopeptide repeat domain 57 227 IPR011990 GO:0005515
Bisa11g2093 832 Gene3D Tetratricopeptide repeat domain 516 618 IPR011990 GO:0005515
Bisa11g2093 832 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 626 660 IPR002885 -
Bisa11g2093 832 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 199 233 IPR002885 -
Bisa11g2093 832 Gene3D Tetratricopeptide repeat domain 228 374 IPR011990 GO:0005515
Bisa11g2093 832 NCBIfam pentatricopeptide repeat 313 347 IPR002885 -
Bisa11g2093 832 NCBIfam pentatricopeptide repeat 524 556 IPR002885 -
Bisa11g2093 832 NCBIfam pentatricopeptide repeat 454 487 IPR002885 -
Bisa11g2093 832 NCBIfam pentatricopeptide repeat 593 626 IPR002885 -
Bisa11g2093 832 NCBIfam pentatricopeptide repeat 628 662 IPR002885 -
Bisa11g2093 832 NCBIfam pentatricopeptide repeat 349 381 IPR002885 -
Bisa11g2093 832 NCBIfam pentatricopeptide repeat 698 731 IPR002885 -
Bisa11g2093 832 NCBIfam pentatricopeptide repeat 383 416 IPR002885 -
Bisa11g2093 832 NCBIfam pentatricopeptide repeat 663 696 IPR002885 -
Bisa11g2093 832 NCBIfam pentatricopeptide repeat 558 592 IPR002885 -
Bisa11g2093 832 NCBIfam pentatricopeptide repeat 488 521 IPR002885 -
Bisa11g2093 832 NCBIfam pentatricopeptide repeat 419 451 IPR002885 -
Bisa11g2093 832 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 451 485 IPR002885 -
Bisa11g2093 832 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 591 625 IPR002885 -
Bisa11g2093 832 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 346 380 IPR002885 -
Bisa11g2093 832 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 416 450 IPR002885 -
Bisa11g2093 832 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 486 520 IPR002885 -
Bisa11g2093 832 PANTHER RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED 215 513 - -
Bisa11g2093 832 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 164 198 IPR002885 -
Bisa11g2093 832 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 311 345 IPR002885 -
Bisa11g2093 832 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 556 590 IPR002885 -
Bisa11g2093 832 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 661 695 IPR002885 -
Bisa11g2093 832 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 381 415 IPR002885 -
Bisa11g2093 832 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 696 730 IPR002885 -
Bisa11g2093 832 Pfam PPR repeat 454 483 IPR002885 -
Bisa11g2093 832 Pfam PPR repeat 276 301 IPR002885 -
Bisa11g2093 832 Pfam PPR repeat 112 137 IPR002885 -
Bisa11g2093 832 Pfam PPR repeat 166 195 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2093 331 738 Glycosyltransferase AT1G05670 30.637 6.13e-64 226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g2093 11 44044909 44049322 Bisa11g2093 11 44044909 44049322 ECH