Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2089 ATGGGAGGTGGAGGAGATTCAGATATTCGAAAGGGAGAAGAGAAGGTGAGATACAGCAGAGATTCGAAAACTGGAAAGGAAGAAGAAGAGACGGTACTCGCACGTGCGAACCTGACTCAAGCATGTGTTCCCAAGTCCTCTCTTCATAAAAATCAACCGCCTTCAGAATTTACATCTTCCCTGATCTCTCTCGATTCTCAGAAGGCTTGCTACAGAGATAGCCTTGCTTCATCGCCGATAGCTGTGTTTCGCGGTGGCTGCCTGTCAACGGGATTTGTATTCGAAGTCGTTTTGCGATGTCGGGGAGGAGGGGGGATCCACTTTATGCGGCAGTTTTCGCACCCACCTACGAGTTTCGAGTCAATACAAGATGTGGTTGTACGACAGTCCGAGCTTAAGTTTCAAACGTTACTTATAAAAACTGTTAAAGTCTGTAATGTTTCTTTGGGAGCAACTGAGCGAGACATTAAGGAGTTCTTTTCTTTTTCTGGTGATATTGAATATGTTGAACTGAGGAGTCATGATGAACGGTCTCAAATTGCCTATGTCACCTTCAAGGATCCACAAGGAGCTGAGACTGCAGTACTATTATCGGGAGCAACAATAGTTGATCTGCCAATTACAATAACTCTTGATACAGATTACCAGCTACCACCTGGTGTTTTGGCATCACCTGTAACTGAAACAGAAATTAGAACTCCTGGTGGTGCTGAATCTGCTTTAAGAAAGGCAGAGGATGTGGTCACCGGCATGCTGGCCAAGGGCTTTGTCTTAGGGAAAGATGCTGTAAACAAAGCGAAGACTTTTGATGAGAAGCACAAGTTATCTTCAACGGCCTCTATGAAAGTTGCATCTTTTGACCAGAAAATAGGTCTGAGTGACAAAATAAGTGCTGGTGCTTCGGCTGTGAGTGGTAGAGTTCGTGAAGTGGATCAGAAGTTTCAGGTTTCAGAGAAAACCAAAACGGCATTTTCAGCTGCAGAACAGAAAGTCAGTGATGCTGGTTCTGCTATTATGAAAAATCGCTATATACTCACTGGGGCTTCTTGGGTAACAGGTGCGTTCAGTAGGGTTGCTAAGGCAGCTGAGGAAGTAGGACAGAAGACAAAGGAGAAAGTGGAGAATGCAGAACAGGAACAGAAGCACAAGGATGATGCATCAGCGACAAATGCACAGTAG 1179 0.4487 MGGGGDSDIRKGEEKVRYSRDSKTGKEEEETVLARANLTQACVPKSSLHKNQPPSEFTSSLISLDSQKACYRDSLASSPIAVFRGGCLSTGFVFEVVLRCRGGGGIHFMRQFSHPPTSFESIQDVVVRQSELKFQTLLIKTVKVCNVSLGATERDIKEFFSFSGDIEYVELRSHDERSQIAYVTFKDPQGAETAVLLSGATIVDLPITITLDTDYQLPPGVLASPVTETEIRTPGGAESALRKAEDVVTGMLAKGFVLGKDAVNKAKTFDEKHKLSSTASMKVASFDQKIGLSDKISAGASAVSGRVREVDQKFQVSEKTKTAFSAAEQKVSDAGSAIMKNRYILTGASWVTGAFSRVAKAAEEVGQKTKEKVENAEQEQKHKDDASATNAQ 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2089 392 SMART rrm1_1 141 210 IPR000504 GO:0003723
Bisa11g2089 392 MobiDBLite consensus disorder prediction 1 31 - -
Bisa11g2089 392 SUPERFAMILY RNA-binding domain, RBD 140 215 IPR035979 GO:0003676
Bisa11g2089 392 Coils Coil 359 379 - -
Bisa11g2089 392 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 144 202 IPR000504 GO:0003723
Bisa11g2089 392 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 128 380 - -
Bisa11g2089 392 FunFam RNA recognition motif-containing protein 138 210 - -
Bisa11g2089 392 MobiDBLite consensus disorder prediction 363 392 - -
Bisa11g2089 392 MobiDBLite consensus disorder prediction 7 31 - -
Bisa11g2089 392 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 140 214 IPR000504 GO:0003723
Bisa11g2089 392 Gene3D - 139 210 IPR012677 -
Bisa11g2089 392 MobiDBLite consensus disorder prediction 363 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2089 Bisa-ChrBisa11 43989668 43994649 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g2089 11 43989668 43994649 Bisa11g2089 11 43989668 43994649 ECH