Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2070 ATGGATCGCCTACGTCGTTTTGGGATGATACCCAGAACTCGTGTTCTGTCGTATTGCTTCGTACTCCTCGTCTTCTTCATCAGCTTCCGCAACGCCGCGTCGTTTAACCTCGCCACTGTACCCTTCGACGATGGCTTCTCTCCGTTGTTCGGAGACGGCAACGTCGTTCGCTCCCCCGACGGCAACGGCGTCCGTCTCCTCCTTGATCGCTTCACTGGTTCGGGTTTCATCTCATCCAGTATGTACCAGTATGGATTCTTCAGCGCCAATATCAAATTGCCTTCCGATTATACTGCCGGCGTTTGCGTCGCTTTTTATACATCGAACGGCGACGTGTTCTCGAAGACACACGACGAGTTGGACTTCGAGTTCTTAGGGAACATAGGAGGGAAGCCATGGAGGTTTCAGACGAACTTGTACGGCAACGGAAGCACCCATCGCGGCCGTGAAGAGCGGTATCGTCTTTGGTTCGATCCAACCAAGGAGTTTCACCGATACAGCATCCTTTGGACCCCCATCAATATTATATTTTACATTGATGAAGTTCCAATAAGAGAGGTACAAAGGAATGAGGAAATGGGTGGTGATTACCCATCAAAGCCAATGTCATTGTATGCTACCGTATGGGATGCTTCAAATTGGGCCACATCTGGTGGTAAATACAAAGTGAATTACAAGTATGCTCCTTTCGTATCAGAGTTCAAGGACCTAGTCCTTGACGGGTGCTCCGCTGACCCGATCCAAGAAATCTCGGCCGGTGCTTGCTTCGAAAGGCATGCCAAGCTCCAAGCTCAAGATTATGCCACTGTAACCCCAACACGCCGACGTGCCATGCGGAGGTTTAGAGAGCGTTACATGTACTACTCATATTGCTATGATACGTTGAGGTACCCTGTACCCCCACCAGAGTGTGTTCTTGTACCCTCGGAGAAACAAAGGTTTAAGGAAACTGGAAGGTTGAAATTTGGTGGCAGTCACCGGCCACGGCGATCTAGGCGAGGTGGTCGGAGTTCCACTCCAGTGAATGACAGTGAGCAAGCTGATATGTGA 1050 0.5019 MDRLRRFGMIPRTRVLSYCFVLLVFFISFRNAASFNLATVPFDDGFSPLFGDGNVVRSPDGNGVRLLLDRFTGSGFISSSMYQYGFFSANIKLPSDYTAGVCVAFYTSNGDVFSKTHDELDFEFLGNIGGKPWRFQTNLYGNGSTHRGREERYRLWFDPTKEFHRYSILWTPINIIFYIDEVPIREVQRNEEMGGDYPSKPMSLYATVWDASNWATSGGKYKVNYKYAPFVSEFKDLVLDGCSADPIQEISAGACFERHAKLQAQDYATVTPTRRRAMRRFRERYMYYSYCYDTLRYPVPPPECVLVPSEKQRFKETGRLKFGGSHRPRRSRRGGRSSTPVNDSEQADM 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2070 349 MobiDBLite consensus disorder prediction 335 349 - -
Bisa11g2070 349 MobiDBLite consensus disorder prediction 316 349 - -
Bisa11g2070 349 PIRSF EndGlu_transf 9 309 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bisa11g2070 349 SUPERFAMILY Concanavalin A-like lectins/glucanases 42 306 IPR013320 -
Bisa11g2070 349 Gene3D - 27 304 - -
Bisa11g2070 349 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 33 234 IPR000757 GO:0004553|GO:0005975
Bisa11g2070 349 Pfam Glycosyl hydrolases family 16 47 226 IPR000757 GO:0004553|GO:0005975
Bisa11g2070 349 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 265 304 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Bisa11g2070 349 CDD GH16_XET 38 304 IPR016455 GO:0010411|GO:0016762|GO:0042546
Bisa11g2070 349 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 39 304 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2070 Bisa-ChrBisa11 43696217 43699756 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2070 22 326 Glycoside Hydrolase AT1G32170 71.895 2.16e-170 476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g2070 11 43696217 43699756 Bisa11g2070 11 43696217 43699756 ECH