Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2009 ATGCCTCAGGAGCAGCCAGCGTCATTTAGAAGGAACTTGTCAAGAAGGCGATCCATCAAGTCTGGGCTAGATACGGATGACAGGGGGTGGACGCCACTTCATGTTTGCGCTCGGAAAGGGGATCTTAAACTGGTTAAAAAACTTCTTGACGAAGGAATGGATGTAAATGTGGTTGCATGTGGCCCAAAATCAAAGGGGGTAACCCCTCTACACCTTGCTGCTGAAGGTGGCCACCTTGAAGTGATGGATGAATTGCTTGAGCGTGGTGCTGACATTGATGCCAGGACTAAGGGTGCTTGTGGCTGGACACCGCTCCACATTGCAGCTAAAGAAAGGAGGAGGGAAGTGGTGAAATTCTTGGTAGAGAATGGAGCATTCTTGGCGCCTGATATCAATGATAGCAGATTTAATCCCCCTCTTCATTATTGCCCAGGACTTGAATGGGCCTATGAGGAAATGAAGCGACATCTACACGAAAACTCATCATGCGGGGAGATGTCTTGCAGCTCAGAAAGCTAA 519 0.4855 MPQEQPASFRRNLSRRRSIKSGLDTDDRGWTPLHVCARKGDLKLVKKLLDEGMDVNVVACGPKSKGVTPLHLAAEGGHLEVMDELLERGADIDARTKGACGWTPLHIAAKERRREVVKFLVENGAFLAPDINDSRFNPPLHYCPGLEWAYEEMKRHLHENSSCGEMSCSSES 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2009 172 ProSiteProfiles Ankyrin repeat region circular profile. 28 57 - -
Bisa11g2009 172 Pfam Ankyrin repeat 100 125 IPR002110 GO:0005515
Bisa11g2009 172 ProSiteProfiles Ankyrin repeat region circular profile. 65 97 - -
Bisa11g2009 172 SUPERFAMILY Ankyrin repeat 25 144 IPR036770 -
Bisa11g2009 172 PANTHER ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED 64 141 - -
Bisa11g2009 172 ProSiteProfiles Ankyrin repeat profile. 28 60 IPR002110 GO:0005515
Bisa11g2009 172 ProSiteProfiles Ankyrin repeat region circular profile. 100 125 - -
Bisa11g2009 172 MobiDBLite consensus disorder prediction 1 21 - -
Bisa11g2009 172 Pfam Ankyrin repeats (3 copies) 23 95 IPR002110 GO:0005515
Bisa11g2009 172 Gene3D - 15 166 IPR036770 -
Bisa11g2009 172 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Bisa11g2009 172 PRINTS Ankyrin repeat signature 29 44 IPR002110 GO:0005515
Bisa11g2009 172 PRINTS Ankyrin repeat signature 81 95 IPR002110 GO:0005515
Bisa11g2009 172 SMART ANK_2a 65 94 IPR002110 GO:0005515
Bisa11g2009 172 SMART ANK_2a 28 57 IPR002110 GO:0005515
Bisa11g2009 172 SMART ANK_2a 100 133 IPR002110 GO:0005515
Bisa11g2009 172 ProSiteProfiles Ankyrin repeat profile. 100 125 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g2009 26 141 Miscellaneous Gene Families AT5G02620 35.897 5.50e-13 64.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g2009 11 42921771 42923783 Bisa11g2009 11 42921771 42923783 ECH