Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g2006 ATGAATCTGTATAAATTGAGGACACCTACCTTTTTAAGTTATTCTTGTTATATTAATTCAATTGATGCAGTTATGCAGGAATGTGATTTTACTTACCATGCATTAACAAACATTCCCGACCTTGATTTTCCCTCTACTGTTACCCCCAATACCTCTTTTCTCTTCTGTTCCCTTCTTCCCTTTCTTCCGAGCTATACTTTTGGAAATCTCTCTTTCTTGAAGGGTCGAGAAAGTTGCTGTTGTTTATCGGAAAGGAAAATGGATGCCATAAGGAAGCAAGCAAGCAAATTAAGGGAGCAAGTTGCCAAGCAGCAGCAGGCCATACTTAGACAATTAGGCCAAATTAGCAATGAACCGCTTATGACAGATGAATCTGAACTTCAATGTCACCAACAACTTCGAAAGTTATACAATTCTACAAAGGCGGCCAAGCATTTCCAGCGACATATTGTTCGTGGTATTGAAGGTTTCACCTCTGTTAGTTCAAAGCAAATGGAGATAGTGAGGAAATTTGCTAAAGACTGTTGTAAGTATGCGACTGAGAACGAAGGAAGTAGTTATGCACTTGCAAGAGCTTCTCTTCACATGGGTAACTCATATGATTTGATGGAAAATGAAAGGGAGACTTTGCTTGGGATCTACAGCCATCAGGTCTCTGAGCCATTACGGGAACAAATAACAGCAGCTCCTTTAGAGGATGCACGCCATCTCACTTACCACTATGACAAACTTTTTCAAGAGGTAGAAGCCCAGGCTGCTGAAGTTTTGAGGCGTCGTTCAAAGTTGAGGGATTCTTCTACTTCTGCAGAGAGCTCCATGAAGCTTCAAAATGCAGAAACAAGGTTGAAAGAGCTTAAATCTGCCTTGGTGGCACTTGGTAGAGAAGCAACTGCTGCTATGTTGTCAGTTGAAGATCAGCAACAACAGATAACTCTCAAAAGCCTTTGCACAATGGTGGATGCTGAGAGAGCTTATCATCAGCATGCCCTTGTTATTTTAGATAAACTATACGCTGAGATGATTCTGGAGAAGCAATCAAAAGAGTCTTTGGCAGTTCCAGTGCCAAGAGATGGATATATTCAGCCTGTAATGGAGAATGCTAATCTAAATGGTTTTGATCATCAAAGCACTGGTCCCACAGCCACCTGCTATTTTGCAAAGGTTGTACACCCTTTTGATGCTCAAGCTGAGGGAGAGTTGAATTTATCAGTTGATGATTATGTTATAGTTCGGCAGGTGGCTGCCAATGGATGGTCTGAAGGAGAATGCAAAGGCAATGCTGGATGGTTTCCCTCTGCATATGTAGAGAGACAGGACAAGATACCAGCTAGCATGATAATGGAAAAAACCTGA 1353 0.4154 MNLYKLRTPTFLSYSCYINSIDAVMQECDFTYHALTNIPDLDFPSTVTPNTSFLFCSLLPFLPSYTFGNLSFLKGRESCCCLSERKMDAIRKQASKLREQVAKQQQAILRQLGQISNEPLMTDESELQCHQQLRKLYNSTKAAKHFQRHIVRGIEGFTSVSSKQMEIVRKFAKDCCKYATENEGSSYALARASLHMGNSYDLMENERETLLGIYSHQVSEPLREQITAAPLEDARHLTYHYDKLFQEVEAQAAEVLRRRSKLRDSSTSAESSMKLQNAETRLKELKSALVALGREATAAMLSVEDQQQQITLKSLCTMVDAERAYHQHALVILDKLYAEMILEKQSKESLAVPVPRDGYIQPVMENANLNGFDHQSTGPTATCYFAKVVHPFDAQAEGELNLSVDDYVIVRQVAANGWSEGECKGNAGWFPSAYVERQDKIPASMIMEKT 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g2006 450 Coils Coil 87 107 - -
Bisa11g2006 450 PANTHER SH3 DOMAIN-CONTAINING 104 438 - -
Bisa11g2006 450 SMART SH3_2 384 439 IPR001452 GO:0005515
Bisa11g2006 450 Pfam Variant SH3 domain 388 436 IPR001452 GO:0005515
Bisa11g2006 450 Gene3D SH3 Domains 384 438 - -
Bisa11g2006 450 ProSiteProfiles Src homology 3 (SH3) domain profile. 381 440 IPR001452 GO:0005515
Bisa11g2006 450 SUPERFAMILY BAR/IMD domain-like 128 340 IPR027267 -
Bisa11g2006 450 Gene3D Arfaptin homology (AH) domain/BAR domain 127 349 IPR027267 -
Bisa11g2006 450 Coils Coil 268 295 - -
Bisa11g2006 450 SUPERFAMILY SH3-domain 383 443 IPR036028 GO:0005515
Bisa11g2006 450 Coils Coil 245 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g2006 Bisa-ChrBisa11 42869893 42880978 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g2006 11 42869893 42880978 Bisa11g2006 11 42869893 42880978 ECH