Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1982 ATGGCGAGTGAATCCTGCGCCAAACTTCCCTCAACTTCGTCGCCAAGTGCGGCGGATTCCTACATTGGCAGCTTCATAAGTCTGATTTCCAAGTACGAGATTCGTTACGAAGGCGTTCTATATCACCTCAACGTCCAGGATTCCACCATTGGCTTGAAGAGCGTCAGATCTTATGGAACAGAGGGGAGAAGAAAAGATGGTCCACAAGTTCCTCCAAGTGATAAGGTTTTTGAATACATTCTTTTCCGAGGAAATGACATCAAGGATTTGCAGGTCAAGAGCCCCTCTACATCTTCCAAATCAGAAGAGCAGATATTCAGTGATCCAGCTATTATTCAGTCACAATATTCTGGAGTGCCTTCAAGTTCTCCTTTGGCTTCAGTTGGTGGGAGAAGTTCAACTGAATCAAGTCGAAGGCAAGACACTCCTGCTATGACCAGTGGATCCCTTCCTGTTGGGTTGCCTTCGCATCAAAACGTATTGCAGCTGAGCTCAGATCGATCTGCTATTTCTCAAGTTTCTGGTGCTCAGTCTTTATCTACACAAAAGTATTGGCCAGAATATAGTGGAAAATCAGGCAGTAGCTCCCATTCTTTGCAGCAATCTGGGCCCTTTCAGCCCCCTTCTGCAGTGTCACCTTTAAATATGCAGAGCTGGGTGCAAACTCCAGAAACTCAGGCACCTTCAATAGTGGGTTGGAATATGTTATCAGAACGTAGTAATCCTGCATCTTCTGCTACTGCTTCATCTCTTGTAAATCCAACTTATGAACCTTCTCCTACCTCTTTACAAACTTCTGATTCTCTAGATAATCCATCTCTTTTGTCCTCTAAGACACCAGTGCCATATCAAGCATCTATGATGTTTTCAAACGTGCCTTCATTTTCTTCACCTTTCCAAAGCATGAATTCTATGGATGGTCAAGTTTCTGGTAAAATTTCTCCTGACACAAGATCAATCTTTCCTGGACACTCTGTCTATCATTCTGCTTCTTCATCTGTAGATTCTACTTCAGGCTCATTGCCACCTCCATCTTTGTTAACTCCGGATCAGTTTTCTCAGCCTAAACAAAATTTCTTTTCTTTACCACAGAACCTTACCCTTGATCAGAAGCATATGGTTTCACTAACACCAACATCCTCTAGCTCCTCTTTTTTAGGAAATTCTCCAGCCTCTCAAGCGCCATTGTTGCCATTGCCGCCATTTCCAACTTCAGTGCATAAGCCTCAGTACTCAACTTCACAATTCAGTGAAGAGTTTGATTTTGAGGCCATGAATGAAAAGTTCAAAAAGGATGAAGTATGGGGTTCTCTGGGGAGGGCATCTAAGATAACAGAGGGAGCGGAGGATAATGCTCCCACCAACAGTTTGGGTGACGGAGAGTTTCATGGGCTGATCCCAAACCCCAACCCAAACCCTAAGCCTGCATATAAGAAAGATGACTTTTTTGACACAATTTCATGTAACTCTTTGACTCATGGATCAAGGAATGGACAGAATCGACTATCTGAGAGAATGAAGCTGGATTCTGAGACATTTGGCAGTTTCCATCAGAGGCCTAGTATGCACTATGGTGCCTATGGTGCTGGACGTGGTGGAAATTACCGGGGCTCATACCATATGGGAAGGGGTTTTGGCCACGGTGGGAGAGGGCGTGGCGGGAATCTTCCTTTCTAG 1677 0.4442 MASESCAKLPSTSSPSAADSYIGSFISLISKYEIRYEGVLYHLNVQDSTIGLKSVRSYGTEGRRKDGPQVPPSDKVFEYILFRGNDIKDLQVKSPSTSSKSEEQIFSDPAIIQSQYSGVPSSSPLASVGGRSSTESSRRQDTPAMTSGSLPVGLPSHQNVLQLSSDRSAISQVSGAQSLSTQKYWPEYSGKSGSSSHSLQQSGPFQPPSAVSPLNMQSWVQTPETQAPSIVGWNMLSERSNPASSATASSLVNPTYEPSPTSLQTSDSLDNPSLLSSKTPVPYQASMMFSNVPSFSSPFQSMNSMDGQVSGKISPDTRSIFPGHSVYHSASSSVDSTSGSLPPPSLLTPDQFSQPKQNFFSLPQNLTLDQKHMVSLTPTSSSSSFLGNSPASQAPLLPLPPFPTSVHKPQYSTSQFSEEFDFEAMNEKFKKDEVWGSLGRASKITEGAEDNAPTNSLGDGEFHGLIPNPNPNPKPAYKKDDFFDTISCNSLTHGSRNGQNRLSERMKLDSETFGSFHQRPSMHYGAYGAGRGGNYRGSYHMGRGFGHGGRGRGGNLPF 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1982 558 Gene3D - 12 97 - -
Bisa11g1982 558 SMART LSM14_2 15 116 IPR025609 -
Bisa11g1982 558 FunFam Trailer hitch, isoform C 15 98 - -
Bisa11g1982 558 ProSiteProfiles Sm domain profile. 13 96 IPR047575 GO:0003723
Bisa11g1982 558 ProSiteProfiles DFDF domain profile. 408 444 IPR025762 -
Bisa11g1982 558 SUPERFAMILY Sm-like ribonucleoproteins 20 96 IPR010920 -
Bisa11g1982 558 ProSiteProfiles FFD box profile. 475 490 IPR025761 -
Bisa11g1982 558 MobiDBLite consensus disorder prediction 331 354 - -
Bisa11g1982 558 MobiDBLite consensus disorder prediction 241 277 - -
Bisa11g1982 558 PANTHER SCD6 PROTEIN-RELATED 16 554 - -
Bisa11g1982 558 Pfam Scd6-like Sm domain 21 94 IPR025609 -
Bisa11g1982 558 SMART FDF_2 414 517 IPR019050 -
Bisa11g1982 558 ProSiteProfiles TFG box profile. 497 517 IPR025768 -
Bisa11g1982 558 MobiDBLite consensus disorder prediction 115 156 - -
Bisa11g1982 558 CDD LSm14_N 18 92 IPR025609 -
Bisa11g1982 558 MobiDBLite consensus disorder prediction 445 478 - -
Bisa11g1982 558 MobiDBLite consensus disorder prediction 187 213 - -
Bisa11g1982 558 Pfam FDF domain 415 515 IPR019050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1982 Bisa-ChrBisa11 42468084 42472955 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1982 11 42468084 42472955 Bisa11g1982 11 42468084 42472955 ECH