Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1978 ATGGCGGATCGGTTAACGCGTATAGCCATCGTGAGCAATGATAGGTGCAAGCCTAAGAAGTGCCGCCAAGAGTGCAAGAAGAGTTGCCCTGTTGTCAGAACAGGTAGGTTGTGTATTGAGGTTACTCCTGCATCTAAGATTGCTTTCATATCCGAAGAATTGTGCATCGGGTGCGGTATATGCGTTAAGAAATGCCCATTTGAAGCCATCCAGATTATCAACTTGCCAAAGGACTTGGACAAAGACACGACTCACAGATATGGTCCTAACACTTTTAAATTACATAGGCTGCCAGTACCAAGGCCAGGGCAAGTCCTAGGGTTGGTTGGAACCAATGGAATTGGGAAGTCCACTGCCCTTAAAGTTTTGGCTGGCAAATTGAAACCAAACTTGGGCCGTTTCAATAACCCGCCTGATTGGCAGGAAATCTTAACCTATTTTCGAGGATCTGAACTGCAAAATTATTTCACTCGTATCCTAGAGGATGATTTAAAGGCGATTATCAAGCCCCAGTATGTTGATCACATCCCAAAAGCTGTTCAAGGGAATGTGGGGCAGGTGCTGGACCAGAAAGATGAGAGAGAGATGAAGAAGGAACTTTGTGCTGATCTTGATCTAAACCAGGTTATAGATCGTAATGTTGGTGATCTTTCTGGTGGGGAGCTCCAAAGGTTTGCTATTGCAGTTGTTGCCATCCAGAATGCTGAAATATACATGTTTGACGAACCTTCTAGTTATCTTGACGTTAGGCAGAGGCTGAAAGCTGCTCAAGTTGTTCGATCTTTGCTCAGGCCTAATAGCTATGTAATTGTTGTAGAGCATGATCTTAGCGTCTTGGACTACTTATCAGACTTTATTTGCTGTTTATATGGCAAACCTGGTGCATATGGAGTTGTAACACTTCCTTTCTCAGTCAGAGAAGGAATAAACATCTTTTTAGCTGGCTTTGTTCCAACTGAAAATCTAAGGTTCAGGGATGATTCTCTTACCTTCAAGGTTGCTGAGACTCCGCAGGAGAGTGCTGAGGAGGCTCAGACATATGCTCGATACAAATACCCGACTATGACCAAAACTCAAGGAAATTTCAAGCTTCGTGTTGTTGAAGGGGAATTCACCGATTCTCAGATTATTGTGATGTTGGGTGAGAATGGGACAGGAAAGACAACATTTATTCGTATGCTGGCTGGTTTGTTGAAACCTGACACTATAGAAGGTGGTTCTGATACAGAGATGCCTGAGTTTAATGTTTCATACAAGCCTCAGAAGATTAGCCCAAAGTTCCAATCAACTGTCAGACACTTGCTCCATCAAAAAATACGTGATGCATACACACACCCCCAGTTTGTGTCAGATGTGATGAAACCCCTCCTTATTGAACAGTTAATGGACCAAGAAGTTGTGAATCTTTCTGGTGGAGAGTTGCAAAGAGTTGCATTATGTCTATGTCTTGGAAAGCCTGCAGACATCTATTTGATAGATGAGCCTAGTGCATATCTTGATTCAGAACAGCGTATTCATGCTGCTAAAGTCATTAAGAGGTTTATCCTCCATGCAAAGAAAACTGCATTCGTGGTTGAGCACGATTTCATCATGGCAACTTATCTTGCTGATAGGGTCATTGTTTATGAGGGGTTAGCATCAGTTGACTGTACTGCAAATTCGCCGCAATCATTGTTGACCGGGATGAACCTTTTCTTATCATTGTATGCACCAAAACATACTATACTATCAACTCGCATCTTGATATCACATTCAGAAGAGATCCAACTAATTACCGCCCGAGGATCAACAAACTGGATTCAACAAAAGACAGGGAACAAAAATCAGCTGGCTCATATTATTACCTTGACGACTGAGTTTATTGTTATGGGCAGTTGCTCATGTTGCCATTTTAGGAGCGCATCAGTTTGA 1911 0.4254 MADRLTRIAIVSNDRCKPKKCRQECKKSCPVVRTGRLCIEVTPASKIAFISEELCIGCGICVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDDLKAIIKPQYVDHIPKAVQGNVGQVLDQKDEREMKKELCADLDLNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIYMFDEPSSYLDVRQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREGINIFLAGFVPTENLRFRDDSLTFKVAETPQESAEEAQTYARYKYPTMTKTQGNFKLRVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDTIEGGSDTEMPEFNVSYKPQKISPKFQSTVRHLLHQKIRDAYTHPQFVSDVMKPLLIEQLMDQEVVNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIHAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIVYEGLASVDCTANSPQSLLTGMNLFLSLYAPKHTILSTRILISHSEEIQLITARGSTNWIQQKTGNKNQLAHIITLTTEFIVMGSCSCCHFRSASV 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1978 636 ProSitePatterns ABC transporters family signature. 469 483 IPR017871 GO:0005524|GO:0016887
Bisa11g1978 636 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 55 66 IPR017900 -
Bisa11g1978 636 SMART AAA_5 373 546 IPR003593 GO:0016887
Bisa11g1978 636 SMART AAA_5 102 294 IPR003593 GO:0016887
Bisa11g1978 636 Pfam 4Fe-4S binding domain 49 71 IPR017896 -
Bisa11g1978 636 Pfam ABC transporter 367 497 IPR003439 GO:0005524
Bisa11g1978 636 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 1 567 IPR013283 -
Bisa11g1978 636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 367 542 IPR027417 -
Bisa11g1978 636 SUPERFAMILY 4Fe-4S ferredoxins 6 145 - -
Bisa11g1978 636 Gene3D - 1 332 IPR027417 -
Bisa11g1978 636 Gene3D - 338 575 IPR027417 -
Bisa11g1978 636 FunFam ATP-binding cassette, sub-family E, member 1 1 332 - -
Bisa11g1978 636 PRINTS ABC transporter family E signature 140 156 IPR013283 -
Bisa11g1978 636 PRINTS ABC transporter family E signature 24 39 IPR013283 -
Bisa11g1978 636 PRINTS ABC transporter family E signature 52 76 IPR013283 -
Bisa11g1978 636 PRINTS ABC transporter family E signature 79 99 IPR013283 -
Bisa11g1978 636 PRINTS ABC transporter family E signature 107 132 IPR013283 -
Bisa11g1978 636 PRINTS ABC transporter family E signature 156 182 IPR013283 -
Bisa11g1978 636 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 46 75 IPR017896 -
Bisa11g1978 636 ProSitePatterns ABC transporters family signature. 217 231 IPR017871 GO:0005524|GO:0016887
Bisa11g1978 636 FunFam ATP-binding cassette sub-family E member 1 334 570 - -
Bisa11g1978 636 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 70 315 IPR003439 GO:0005524
Bisa11g1978 636 Pfam Possible Fer4-like domain in RNase L inhibitor, RLI 6 37 IPR007209 -
Bisa11g1978 636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 291 IPR027417 -
Bisa11g1978 636 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 344 569 IPR003439 GO:0005524
Bisa11g1978 636 CDD ABC_RNaseL_inhibitor_domain1 78 332 IPR034348 -
Bisa11g1978 636 Pfam ABC transporter 102 244 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1978 Bisa-ChrBisa11 42357532 42362595 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1978 11 42357532 42362595 Bisa11g1978 11 42357532 42362595 ECH