Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1973 ATGCGAACGATGTCGTTTTGTTTCACTGCCCCAATGGTCTCTCTGCTCAGTGCTCACGCTCCCTCTAGTCACTGTGAAGTGCGAACTGTGGTTGATCTGCTCTCTGCTAGGGTTTTAGAAGCCGAAAGAAAGGGTTTCGTGAGGGTTTCTCCGGCGATCATGGCTGCGGCTAGGGTTTTTGGCCAATACAGTAGAGCTCTGATGGCGGCGGCAGCGAAGGGGGCTGCGTCCGGCGTGAAGACTGCGGCGAAGACGGCCCCACCGAAGAGTCGAGCCAACGTCGGCTTGCTCAAGGTGGTCCCCGTCTCTCCGCAGCTCGGCAAGTTTCTCGGTTCCTCTGAATCTTCACGCACCGATGCCATCAAGAAAGTTTGGGAGTACATCAAGCTCCACAATCTTCAGAATCCTACAAATAAGAAGGAGATCGTTTGTGATGAGAAGTTGAAAACCATTTTTGATGGGAAAGATCGAGTAGGGTTCACAGAGATTGCTAGATATCTGTCCAACCATTTTGTGAAATCAGGCTGA 528 0.517 MRTMSFCFTAPMVSLLSAHAPSSHCEVRTVVDLLSARVLEAERKGFVRVSPAIMAAARVFGQYSRALMAAAAKGAASGVKTAAKTAPPKSRANVGLLKVVPVSPQLGKFLGSSESSRTDAIKKVWEYIKLHNLQNPTNKKEIVCDEKLKTIFDGKDRVGFTEIARYLSNHFVKSG 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1973 175 SMART swib_2 96 175 IPR019835 -
Bisa11g1973 175 Gene3D SWIB/MDM2 domain 90 175 IPR036885 -
Bisa11g1973 175 CDD SWIB-MDM2_like 100 171 - -
Bisa11g1973 175 Pfam SWIB/MDM2 domain 100 171 IPR003121 -
Bisa11g1973 175 ProSiteProfiles SWIB/MDM2 domain profile. 95 173 IPR003121 -
Bisa11g1973 175 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 79 172 - -
Bisa11g1973 175 SUPERFAMILY SWIB/MDM2 domain 95 173 IPR036885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1973 Bisa-ChrBisa11 42319077 42320718 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Bisa11g1973 SWIB 2.4e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1973 11 42319077 42320718 Bisa11g1973 11 42319077 42320718 ECH