Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1933 ATGAGGGAAGTTGTAATTGTTGCAGTCGCTGCGACCCTCGGAAATCTTCTTGTAGGATGGGATAGCTCAGCCATTGCAGGGGGTATGACATACATAAAACAAGAATTCGACTTGGAGGCTGATCCTACACTTGAAGGGCTAATTGTGTCTATGACGTTTCTCACTGGCACTTTCGTGACAATATTTTCCGGAAAAGTCTCCGATATTCTTGGACGGCGTCCTATGCTGATACTATCTTCAGTGATGTATTTCTTTAGCGGTTTGGTGATGTTGTGGGCTCCTAATGTATATATTGTTCTGCTCTCGAGGCTATTAGATGGGATTGGCATTGCTCTCGCTGTCACTCTTACTCCTCTCTACATATCTGAGATAGCACCTGCTGATATTAGAGGTCAATTGAATACTGTTACACAGTTTTCTTGTTCTGCTGGGATGTTTCTGGCTTACTGCATGGTGTTCTCAATGTCTTTAATGGCCTCACCAAGTTGGAGAGTGATGCTTGGGGTTATTTTTGTTCCTGCTGTTGCTTATTTTCTCCTTACTGTGTTTTACCTGCCTGAATCTCCCCGGTGGCTTGTGAGCAAAGGCCGAGTCGACGAGGCTAAGAAGGTCTTACAAAGATTACGTGGCACTGAAGATGTTTCAGGTGAGTTGGCCTTACTGGCTGAGGGTCTGAGCCCTGGGGGAGAAAACACCTCCATAGAAGAGTACATAGTTGCCCCATTGAATGAGCTCAATGCTGACCAGGAAGCAGGGAAGGATTACATAAAGCTATATGGACCCAATGAGGAAGTCTCAATGGTGGCCCAACCAGTGAATGCACAGGGCAGCATGATGTCCCGTCAAGCGAGCATTGTGTCCCAGAGCACAAGTCTTAAGGATCCCATTGTCACCCTCTTTGGAAGTGTGCATGATACTCTTCCTGAGCCTGGAAGTGCAAAGGGTATGACCAAAGGGATCAGCTTCTCCAGTATGGTTGATTCAGAGTCCAACCCATATGGTACTGGTGACAACCTGCATGCGCCTTTCCTTTCGCCTAAAGACAAGACTCATGGATCTAAGGGTGGCATGTTTGGCTTCATAAGCAACAGTAGCCTGAGAAGTGAAGGAATGCTAGGAATGAGAAGTGAAGGAATGATAGGAATGAGAAGTAATAGCAGCTTGAGAAGTGATGGCATGTTAGGCATGAGAAGCAATAGTAGCTTGAACCAGGGGAATGTTGGTGAAGTACCTACGAATACAAACATCGGTGGTGGTTGGCAGTTGGTTTACAAAGCATCTGATAAGGTTAAGGGTGGAGGGCTCCAAAGGGTTTATTTGCACGCAGAAGCTGCCCCACCGTCTCAATTCAATTCGTTTGTTTCAACTTCGGGTTATGACATACCTGTAGAAGGTGATGCTTTTCCAGCTGCTGCACTAGTCAGCCACTCAGTTATTGGATCCAAGGATATGCTGCATTATCCAGAAGTTGTTCCAAAAGGTCCCGGTTGGAGAGCTCTGCTTGAACCTGGGGTGAAGCGTGCATTAATAGTCGGAATAGGACTTCAAATTCTTCAGCAGGACTCAGGAGTTGGGGCTCTTGTGTCAAATTTGGGAATTAGTTCATCATCTGCTTCTTTACTCATAAATGTTTTCACCACATTCTGCATGCTTCCCTGTATAGCTCTTTCTATTAGGCTCATGGATATGTCTGGCAGGAGGTCAATAATGTTGTACACGATACCTATTCTGATAGTGTCCCTTGTGGTGCTGGTAATCCGAGACTCTTTCAACATCAGTTCAGTGGTGAATGCCGCAATTACTGCTGTTTGTGTTGTGGTGTATGAAAGTGTGTTCTGCATGGGATTTGGTGTGATTCCCAACATAATATGTGCAGAAATCTTCCCTACCGGTGTTCGTGGAATCTGCATTTCTATGTGTTCCCTTACATACTGGATTTGCACCTTGATTGTCACTTCTACGTTCCCACTTTTGCTTCAACTCCTCGGCCTCACCGGCGTCTTCGGATTGTTTGTCGGGGGATGCATGCTTTCATGGATATTTGTTTACTTGAAAGTTCCTGAAACAAAGGGCATGCCCTTGGAAGTCATCATTGAATTTTTCGCTATTGGTGCAAAGCCTGGTACTGATCCTGCTACCATGGGAATGAAAAGTTGA 2157 0.4548 MREVVIVAVAATLGNLLVGWDSSAIAGGMTYIKQEFDLEADPTLEGLIVSMTFLTGTFVTIFSGKVSDILGRRPMLILSSVMYFFSGLVMLWAPNVYIVLLSRLLDGIGIALAVTLTPLYISEIAPADIRGQLNTVTQFSCSAGMFLAYCMVFSMSLMASPSWRVMLGVIFVPAVAYFLLTVFYLPESPRWLVSKGRVDEAKKVLQRLRGTEDVSGELALLAEGLSPGGENTSIEEYIVAPLNELNADQEAGKDYIKLYGPNEEVSMVAQPVNAQGSMMSRQASIVSQSTSLKDPIVTLFGSVHDTLPEPGSAKGMTKGISFSSMVDSESNPYGTGDNLHAPFLSPKDKTHGSKGGMFGFISNSSLRSEGMLGMRSEGMIGMRSNSSLRSDGMLGMRSNSSLNQGNVGEVPTNTNIGGGWQLVYKASDKVKGGGLQRVYLHAEAAPPSQFNSFVSTSGYDIPVEGDAFPAAALVSHSVIGSKDMLHYPEVVPKGPGWRALLEPGVKRALIVGIGLQILQQDSGVGALVSNLGISSSSASLLINVFTTFCMLPCIALSIRLMDMSGRRSIMLYTIPILIVSLVVLVIRDSFNISSVVNAAITAVCVVVYESVFCMGFGVIPNIICAEIFPTGVRGICISMCSLTYWICTLIVTSTFPLLLQLLGLTGVFGLFVGGCMLSWIFVYLKVPETKGMPLEVIIEFFAIGAKPGTDPATMGMKS 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1933 718 SUPERFAMILY MFS general substrate transporter 9 695 IPR036259 -
Bisa11g1933 718 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 4 702 - -
Bisa11g1933 718 Pfam Sugar (and other) transporter 7 223 IPR005828 GO:0016020|GO:0022857|GO:0055085
Bisa11g1933 718 Pfam Sugar (and other) transporter 496 698 IPR005828 GO:0016020|GO:0022857|GO:0055085
Bisa11g1933 718 Gene3D MFS general substrate transporter like domains 2 253 IPR036259 -
Bisa11g1933 718 ProSitePatterns Sugar transport proteins signature 1. 63 80 IPR005829 GO:0016020|GO:0022857|GO:0055085
Bisa11g1933 718 FunFam Monosaccharide-sensing protein 3 2 249 - -
Bisa11g1933 718 PRINTS Sugar transporter signature 602 623 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bisa11g1933 718 PRINTS Sugar transporter signature 519 529 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bisa11g1933 718 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bisa11g1933 718 PRINTS Sugar transporter signature 100 119 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bisa11g1933 718 PRINTS Sugar transporter signature 625 637 IPR003663 GO:0016020|GO:0022857|GO:0055085
Bisa11g1933 718 Gene3D MFS general substrate transporter like domains 485 703 IPR036259 -
Bisa11g1933 718 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 690 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1933 Bisa-ChrBisa11 41705706 41710147 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1933 51 706 Organic Solute Cotransporters AT3G51490 50.907 0.0 647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1933 11 41705706 41710147 Bisa01g4217 01 100701100 100728128 CCT
Bisa11g1933 11 41705706 41710147 Bisa11g1933 11 41705706 41710147 ECH
Bisa01g4217 01 100701100 100728128 Bisa11g1933 11 41705706 41710147 ECH