Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1890 ATGGCGAGAAGATCCGGACCGCTTCTTAAACGCCTCTTCAAGGTATCACAATCGTTGGAGGCTCCAAGTATCCTTCCCTCATGCTCCAGATTCAACCCCAATCGGTCTGTGACGTACATGCCCCGGCCTGGAGATGGAGCTCCACGCGCTGTCACACTTATACCAGGAGACGGAATAGGGCCTCTGGTCACCGGTGCCGTCGAGCAGGTGATGGGGGCGATGCACGCGCCTGTGTACTTCGAGAAATATGAAGTGCGCGGGGACATGAAGAGCGTACCGCAGGAGGTGATCGATTCGATAAAGAAGAATAAAGTGTGCTTGAAGGGTGGTTTGGCTACGCCTGTGGGCGGTGGTGTGAGCTCGTTGAATATGCAGCTCAGGAGAGAGCTTGATCTATACGCTTCGCTTGTGAATTGTTTTAATCTTCCTGGGTTGCCCACGAAGCATGAGAATGTTGATATTGTCGTGATTAGAGAGAACACCGAAGGAGAGTATGCCGGTTTGGAACACGAGGTCGTTCCAGGCGTCGTCGAAAGCCTTAAGGTAATAACAAAGTTCTGTTCGGAGCGCATTGCTAGATATGCTTTTGAGTATGCTTACCTAAATAACAGAAAGATGGTGACTGCTGTGCACAAAGCAAACATTATGAAGCTTGCAGATGGTTTGTTTTTGGAATCTTGTCGAGAGGTTGCCACAAATTATCCCGGAATCAAATATAACGAAATTATTGTGGATAACTGCTGCATGCAACTTGTTTCAAAGCCTGAGCAATTTGACGTCATGGTAACTCCCAATCTTTATGGAAATCTAGTTGCGAATACAGCAGCAGGTATTGCTGGAGGCACAGGAGTTATGCCAGGAGGTAATGTTGGGGCTGATTTTGCGGTGTTTGAGCAAGGTGCTTCAGCAGGGAATGTTGGTAATGAGAAGTTAATGGAACAAAAGACAGCAAACCCAGTGGCACTACTTCTCTCATCTGCCATGATGCTTAGACATCTCCAGTTTCCTGCCTTTGCTGATCGATTGGAAACTGCAGTTAAAGGAGTCATTCTAGAGGGAAAGTACCGCACAAAGGACCTTGGAGGTTCAAGCACCACCCAAGAGATTGTTGATGCAGTTATAGCTGCCTTGGATTGA 1137 0.4776 MARRSGPLLKRLFKVSQSLEAPSILPSCSRFNPNRSVTYMPRPGDGAPRAVTLIPGDGIGPLVTGAVEQVMGAMHAPVYFEKYEVRGDMKSVPQEVIDSIKKNKVCLKGGLATPVGGGVSSLNMQLRRELDLYASLVNCFNLPGLPTKHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIARYAFEYAYLNNRKMVTAVHKANIMKLADGLFLESCREVATNYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADFAVFEQGASAGNVGNEKLMEQKTANPVALLLSSAMMLRHLQFPAFADRLETAVKGVILEGKYRTKDLGGSSTTQEIVDAVIAALD 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1890 378 NCBIfam isocitrate dehydrogenase (NAD(+)) 47 376 IPR004434 GO:0006099
Bisa11g1890 378 Pfam Isocitrate/isopropylmalate dehydrogenase 51 373 IPR024084 -
Bisa11g1890 378 FunFam Isocitrate dehydrogenase [NAD] regulatory subunit 1 38 377 - -
Bisa11g1890 378 SMART Iso_dh_2 50 373 IPR024084 -
Bisa11g1890 378 Gene3D Isopropylmalate Dehydrogenase 40 377 - -
Bisa11g1890 378 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 50 377 - -
Bisa11g1890 378 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 47 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1890 Bisa-ChrBisa11 41023941 41027383 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1890 11 41023941 41027383 Bisa01g4197 01 100361149 100361877 CCT
Bisa11g1890 11 41023941 41027383 Bisa11g1890 11 41023941 41027383 ECH