Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1669 ATGTTTGGGCCTGGTTCCGGATGGGCTAAACCCGAACTGGGAAAAGCAAGCTCAGAGTTTATAGAGCAAGAAGGACATGTGGCGGTGCGTTGCCCGTCGGCTTCGTTCCAAGAGACGGACTCCTATCCTAATGACTCACTTAGATCTCACATTTCTAGATTTTTCTCTACTGGGACAAACTCATATACTGTGGTGGATCATACTTATGATGCAATCGTTGTAGGAGCCGGTGGTGCAGGGTTGAGAGCTGCTATTGGACTGTCGGAACATGGGTTCAATACTGCTTACATTACTAAGCTTTTCCCAACTCGTTCACACACGGTTGCAGCTCAGGGTGGTATAAATGCTGCATTGGGAAATATGACTGAGGATGACTGGAAGTGGCACATGTACGACACAGTCAAGGGAAGTGATTGGCTAGGAGATCAGGATGCCATCCATTATATGTGCAGGGAAGCACCAAAAGCAATCATTGAACTTGAGAATTATGGATTACCATTTTCCCGAACTGAGGATGGAAGAATATACCAGCGTGCATTTGGTGGTCAAAGCCTGAACTTTGGAAAAGGTGGACAGGCATACCGTTGTGCATGCGTTGCTGATGGAACTGGACATGCTTTATTGCACACTCTCTATGGCATTTGCCAAGGAGTAATTGCATTGAATATGGAGGATGGAACATTACATCGGTTCCAAGCTGCTTCAACAATTATGGCTACAGGAGGTTATGGTAGAGCATATTTTTCTGCAACCTCTGCACACACATGCACAGGGGACGGCAATGCCATGGTTGCACGCGCGGGGCTCCCACTCCAGAATTTGGAGTTTGTGCAATTTCACCCAACAGGTATATATGGAGCTGGTTGCCTAATCACAGAAGGTTCTCGTGGAGAAGGTGGAATCCTTTGGAACAGTGAGGGACCTATGAAAGATCACATTTATCTACACTTAAATCACTTGCCTCCGGATATGCTTAAGGAAAGGCTTCCTGGCATCTCCGAAACTGCTGCTATTTTTGCTGGTGTGGATGTAACGAAGGAACCCATTCCTGTTTTGCCAACTGTGCACTACAACATGGGTGGTATTCCCACAAACCATCACGGAGAGGTAGTTACTATTCAAGGTGATAATCCAGATGCAGTAGTACCTGGATTAATGGCTGCTGGGGAAGCAGCCTGTGCATCAGTCCATGGTGCCAACAGGCTTGGTGCGAATTCACTTCTGGATATCGTTATTTTTGGAGGGAAACAAAAGCCGTTGGAGAAGGAAGCTGGTCAAAAGACAATTGCATGGCTGGACAAATTGAGAAATTCAAATGGTTCATTGCCAACTTCAAACATTCGCTTAAATATGCAACGAATAATGCAAAACAATGCTGCTGTGTTCCGTACACAGGAAACATTAGAAGAAGGTTGTAAATTAACTGATAAAACATGGGAGAGTTTTCATGATGTCAATTTGAAGGACCGGAGCCTGATATGGAACTCTGACTTAATTGAGACAATTGAGTTGGAAAACCTTTTGATAAATGCCAGCATCACCATGCACTCTGCTGAAGCCAGGAAAGAGAGTAGAGGAGCACATGCCCGTGAAGACTTCACGAAAAGAGATGATGAGAATTGGATGAAGCACACATTAGGATATTGGGAGAATAAGGAGGTCCGCTTAGATTACAGGCCGGTGCACATGAATACATTGGATAATGAGGTTGAAACATTCCCTCCTCAGGCTCGTGTGTATTAA 1743 0.4509 MFGPGSGWAKPELGKASSEFIEQEGHVAVRCPSASFQETDSYPNDSLRSHISRFFSTGTNSYTVVDHTYDAIVVGAGGAGLRAAIGLSEHGFNTAYITKLFPTRSHTVAAQGGINAALGNMTEDDWKWHMYDTVKGSDWLGDQDAIHYMCREAPKAIIELENYGLPFSRTEDGRIYQRAFGGQSLNFGKGGQAYRCACVADGTGHALLHTLYGICQGVIALNMEDGTLHRFQAASTIMATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQNLEFVQFHPTGIYGAGCLITEGSRGEGGILWNSEGPMKDHIYLHLNHLPPDMLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIQGDNPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVIFGGKQKPLEKEAGQKTIAWLDKLRNSNGSLPTSNIRLNMQRIMQNNAAVFRTQETLEEGCKLTDKTWESFHDVNLKDRSLIWNSDLIETIELENLLINASITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENKEVRLDYRPVHMNTLDNEVETFPPQARVY 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1669 580 Gene3D Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 309 350 IPR027477 -
Bisa11g1669 580 Gene3D succinate dehydrogenase protein domain 531 580 - -
Bisa11g1669 580 SUPERFAMILY Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 274 357 IPR027477 -
Bisa11g1669 580 Gene3D - 420 530 - -
Bisa11g1669 580 PANTHER SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT 50 307 IPR030664 -
Bisa11g1669 580 Gene3D - 351 417 IPR036188 -
Bisa11g1669 580 FunFam Succinate dehydrogenase flavoprotein subunit (SdhA) 419 535 - -
Bisa11g1669 580 Gene3D - 214 308 IPR036188 -
Bisa11g1669 580 Gene3D - 53 213 IPR036188 -
Bisa11g1669 580 FunFam Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1 mitochondrial 305 368 - -
Bisa11g1669 580 SUPERFAMILY FAD/NAD(P)-binding domain 61 414 IPR036188 -
Bisa11g1669 580 SUPERFAMILY Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 439 580 IPR037099 GO:0016491
Bisa11g1669 580 ProSitePatterns Fumarate reductase / succinate dehydrogenase FAD-binding site. 104 113 IPR003952 GO:0016491
Bisa11g1669 580 Pfam Fumarate reductase flavoprotein C-term 449 580 IPR015939 GO:0016491
Bisa11g1669 580 Pfam FAD binding domain 215 307 IPR003953 -
Bisa11g1669 580 Pfam FAD binding domain 70 212 IPR003953 -
Bisa11g1669 580 Pfam FAD binding domain 308 407 IPR003953 -
Bisa11g1669 580 FunFam Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial 532 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1669 Bisa-ChrBisa11 37962968 37971201 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1669 11 37962968 37971201 Bisa01g1873 01 32569139 32575639 CCT
Bisa11g1669 11 37962968 37971201 Bisa11g1669 11 37962968 37971201 ECH