Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g1226 ATGGGCTGCATCTATTCTAAGGGAGGAAATAAGGAGGACCCTTCAATTCTTGCATCAGAGACAGCTTTCAGCGTTAGCGAGGTTGAAGCACTGTTTGAGCTTTTTAAGATCATCAGCAGTTCTGTCATTAATGATGGATTAATCTGCAAGCAAGAGTTTCAGTTGGCAATTTTCAAGGATAAGAAAAGGGATAATCTCTTTGCAAGTCGGGTCTTTGATCTGTTTGATATTAAGAAGAAAGGAGTAATTGATTTCGGGGACTTTGTTAGATCACTCAGTGTCTTCCACCCTAGAGCATCACGACAAGACAAGATAGATTTTTCATTCAGGATATATGATTTGGAAAATAAGGGCTTTATAGAACGCCAAGAGGTCAAAAGAATGTTGATTGCCCTTCTTTCCGAATCTGACACGAAGTTGGCAGATGAGGCAATAGAAACAATTATTGATAAGACTTTCTTGGTTGCTGATACGAACCAAGATGGGAAAATAGACAAGTTCGAATGGCAAAAGTTCGTTTCTGAGAATCCCTCACTACTGAAAGTCATGACCCTACCCTACCTGAGGGAGTTAACTACAGCCTTCCCAAGTTTTGTATTTAATTCTAAGGTTGAAGAAATTACAGCTTGA 630 0.3937 MGCIYSKGGNKEDPSILASETAFSVSEVEALFELFKIISSSVINDGLICKQEFQLAIFKDKKRDNLFASRVFDLFDIKKKGVIDFGDFVRSLSVFHPRASRQDKIDFSFRIYDLENKGFIERQEVKRMLIALLSESDTKLADEAIETIIDKTFLVADTNQDGKIDKFEWQKFVSENPSLLKVMTLPYLRELTTAFPSFVFNSKVEEITA 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g1226 209 PANTHER CALCINEURIN B 2 206 IPR045198 GO:0005509|GO:0019722|GO:0019900
Bisa11g1226 209 PRINTS Recoverin family signature 71 92 - -
Bisa11g1226 209 PRINTS Recoverin family signature 118 136 - -
Bisa11g1226 209 PRINTS Recoverin family signature 164 184 - -
Bisa11g1226 209 ProSiteProfiles EF-hand calcium-binding domain profile. 63 98 IPR002048 GO:0005509
Bisa11g1226 209 Pfam EF-hand domain pair 103 173 IPR002048 GO:0005509
Bisa11g1226 209 Gene3D - 13 207 - -
Bisa11g1226 209 ProSiteProfiles EF-hand calcium-binding domain profile. 100 135 IPR002048 GO:0005509
Bisa11g1226 209 SMART efh_1 67 95 IPR002048 GO:0005509
Bisa11g1226 209 SMART efh_1 148 176 IPR002048 GO:0005509
Bisa11g1226 209 SMART efh_1 104 132 IPR002048 GO:0005509
Bisa11g1226 209 FunFam calcineurin B-like protein 3 13 206 - -
Bisa11g1226 209 ProSiteProfiles EF-hand calcium-binding domain profile. 144 179 IPR002048 GO:0005509
Bisa11g1226 209 CDD EFh 104 174 IPR002048 GO:0005509
Bisa11g1226 209 SUPERFAMILY EF-hand 15 197 IPR011992 -
Bisa11g1226 209 ProSitePatterns EF-hand calcium-binding domain. 157 169 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g1226 Bisa-ChrBisa11 30947529 30952600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g1226 1 209 EF-hand Containing Proteins AT4G17615 70.892 7.68e-110 311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1226 11 30947529 30952600 Bisa01g1029 01 17431929 17434850 CCT
Bisa11g1226 11 30947529 30952600 Bisa11g1226 11 30947529 30952600 ECH