Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0973 ATGTTAATGGCAGGAACTAGCACTTCTTGTTGTATACTTGAGTCTGGAGTAGGTGACAAAATCCCATTACCTCCATCCTCCTGCATCTACAAAACCCCCCCTCCCCTGCATTGCTCCAACGCTCTTCCCCTCTCATCTTCTGCTCTAATATCTGATTCTGTCAATTCCCACAAGCTTTTTCCATATTTCACCATGAGAGAAATCCTGCACATCCAAGCTGGTCAATGTGGCAACCAAATTGGAGGTAAGTTTTGGGAGGTTATGTGCGATGAACATGGCATAGATCCCACCGGAAATTATGTGGGAAATTCCCATCTTCAACTCGAGAGGGTTAACGTTTACTACAACGAAGCAAGTGGTGGTCGCTATGTTCCTCGAGCCGTGCTGATGGACCTTGAACCAGGGACCATGGACAGCCTGCGTTCTGGTCCTTATGGAAGAATCTTCAGGCCTGACAACTTCGTGTTCGGCCAAAATGGAGCTGGAAACAACTGGGCTAAAGGCCATTACACTGAGGGGGCAGAGCTCATTGATGCCGTTCTTGATGTTGTTCGTAAAGAAGCAGAGAATTGTGATTGCTTGCAGGGTTTCCAGGTTTGTCATTCGTTGGGAGGTGGAACTGGGTCTGGAATGGGGACCTTGTTGATATCAAAGATCAGAGAAGAGTATCCTGATAGGATGATGATGACTTTCTCAGTCTTCCCGTCTCCTAAGGTCTCTGACACAGTTGTTGAACCTTACAATGCCACCCTCTCTGTTCATCAACTTGTTGAAAATGCAGATGAATGCATGGTCCTCGACAATGAGGCTCTTTATGACATCTGTTTCAGAACTCTCAAGCTCACTAATCCAAGTTTTGGTGATCTCAACCATTTGATCTCAACAACAATGAGTGGAGTAACATGTTGCCTTCGGTTTCCGGGACAACTCAACTCCGATCTTCGCAAACTAGCCGTTAACCTCATCCCCTTCCCTCGCCTTCACTTCTTCATGGTGGGTTTCGCGCCCTTAACATCTCGAGGATCCCAAGAATACAGAGCCCTCACCATCCCCGAGCTCACTCAACAGATGTGGGACGCCAGAAACATGATGTGTGCAGCAGACCCCCGACATGGCAGGTACCTGACAGCCTCGGCCATGTTCCGAGGTAGAATGAGCACCAAGGAGGTGGACGAACAGATGATCAACGTGCAGAACAAGAACTCCTCGTACTTTGTCGAATGGATCCCAAACAATGTGAAGTCAAGTGTGTGCGACATCCCTCCAACTGGGTTGTCCATGTCGTCGACGTTCATGGGGAATTCGACCTCCATTCAGGAGATGTTCAGGCGGGTTTCGGAGCAGTTCACGGTGATGTTCAAGAGGAAGGCGTTCTTGCATTGGTACACTGGGGAGGGTATGGATGAGATGGAGTTCACTGAGGCTGAGAGTAATATGAATGATTTGGTGGCAGAGTATCAGCAGTATCAGGATGCTGCAGCAGATGAAGAAGATGAGGTTGAGGAGGAAGAGGAAGGTGTGCGTGAATGA 1530 0.4837 MLMAGTSTSCCILESGVGDKIPLPPSSCIYKTPPPLHCSNALPLSSSALISDSVNSHKLFPYFTMREILHIQAGQCGNQIGGKFWEVMCDEHGIDPTGNYVGNSHLQLERVNVYYNEASGGRYVPRAVLMDLEPGTMDSLRSGPYGRIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISTTMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQEYRALTIPELTQQMWDARNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTGLSMSSTFMGNSTSIQEMFRRVSEQFTVMFKRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDAAADEEDEVEEEEEGVRE 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0973 509 PRINTS Beta-tubulin signature 152 163 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa11g0973 509 PRINTS Beta-tubulin signature 172 190 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa11g0973 509 PRINTS Beta-tubulin signature 294 303 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa11g0973 509 PRINTS Beta-tubulin signature 329 345 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa11g0973 509 PRINTS Beta-tubulin signature 375 393 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa11g0973 509 PRINTS Beta-tubulin signature 309 322 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa11g0973 509 PRINTS Beta-tubulin signature 441 452 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa11g0973 509 PRINTS Beta-tubulin signature 393 407 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa11g0973 509 PRINTS Beta-tubulin signature 411 434 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa11g0973 509 PRINTS Beta-tubulin signature 276 288 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa11g0973 509 PRINTS Beta-tubulin signature 216 228 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa11g0973 509 PRINTS Beta-tubulin signature 105 122 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa11g0973 509 PRINTS Beta-tubulin signature 476 494 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Bisa11g0973 509 SMART Tubulin_C_4 310 447 IPR018316 -
Bisa11g0973 509 CDD beta_tubulin 66 490 - -
Bisa11g0973 509 PRINTS Tubulin signature 254 274 IPR000217 GO:0005874|GO:0007017
Bisa11g0973 509 PRINTS Tubulin signature 115 134 IPR000217 GO:0005874|GO:0007017
Bisa11g0973 509 PRINTS Tubulin signature 74 94 IPR000217 GO:0005874|GO:0007017
Bisa11g0973 509 PRINTS Tubulin signature 240 253 IPR000217 GO:0005874|GO:0007017
Bisa11g0973 509 PRINTS Tubulin signature 170 194 IPR000217 GO:0005874|GO:0007017
Bisa11g0973 509 PRINTS Tubulin signature 434 462 IPR000217 GO:0005874|GO:0007017
Bisa11g0973 509 PRINTS Tubulin signature 157 168 IPR000217 GO:0005874|GO:0007017
Bisa11g0973 509 PRINTS Tubulin signature 196 214 IPR000217 GO:0005874|GO:0007017
Bisa11g0973 509 PRINTS Tubulin signature 215 236 IPR000217 GO:0005874|GO:0007017
Bisa11g0973 509 Gene3D Helix hairpin bin 438 507 IPR023123 -
Bisa11g0973 509 Pfam Tubulin C-terminal domain 325 446 IPR018316 -
Bisa11g0973 509 MobiDBLite consensus disorder prediction 491 509 - -
Bisa11g0973 509 Gene3D - 327 437 IPR037103 -
Bisa11g0973 509 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 204 210 IPR017975 GO:0005525|GO:0005874|GO:0007017
Bisa11g0973 509 PANTHER TUBULIN 67 490 IPR000217 GO:0005874|GO:0007017
Bisa11g0973 509 FunFam Tubulin beta chain 65 326 - -
Bisa11g0973 509 FunFam Tubulin beta chain 328 437 - -
Bisa11g0973 509 MobiDBLite consensus disorder prediction 490 509 - -
Bisa11g0973 509 SUPERFAMILY Tubulin C-terminal domain-like 308 492 IPR008280 -
Bisa11g0973 509 Gene3D Tubulin/FtsZ, GTPase domain 65 326 IPR036525 -
Bisa11g0973 509 FunFam Tubulin beta chain 438 509 - -
Bisa11g0973 509 SUPERFAMILY Tubulin nucleotide-binding domain-like 65 307 IPR036525 -
Bisa11g0973 509 Coils Coil 472 509 - -
Bisa11g0973 509 Pfam Tubulin/FtsZ family, GTPase domain 67 275 IPR003008 GO:0005525
Bisa11g0973 509 SMART Tubulin_4 111 308 IPR003008 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0973 Bisa-ChrBisa11 26311434 26315417 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g0973 11 26311434 26315417 Bisa11g0973 11 26311434 26315417 ECH