Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0950 ATGTCTTCGCCCAGCAAACGCCGAGAGATGGACTTGATGAAGCTGATGATGAGCGATTACAAGGTGGAGATGATCAATGATGGCATGCAGGAGTTTTATGTGCATTTTCACGGGCCTAAAGACAGTCCTTATCATGAAGGTGTGTGGAAGATAAGGGTAGAGCTCCCTGATGCCTATCCTTATAAATCTCCATCCGTTGGTTTTGTCAACAAAATATACCACCCTAATGTAGATGAAATGTCTGGCTCAGTTTGCCTAGATGTTATCAACCAGAGCTGGAGTCCCATGTTTGATCTGGTCAATGTATTTGAAGTGTTTCTTCCCCAACTTCTTCTCTACCCCAACGCATCTGATCCATTGAATTGTGAAGCTGCTGCATTGATGATGCGTGATCGCCCTGCATATGAACAAAGAGTAAAAGAATATTGTGAAAAGTATGCTAAGCCAGAAGATGTTGGGGCTTCCCAGGAGGAAAACTCAATTGATGATGAGGAGCTGAGCGAAGACGACTATGTCTCTAGTGATGAGGCAATAGCTGGCCATCCTGATCCCTAG 555 0.445 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFYVHFHGPKDSPYHEGVWKIRVELPDAYPYKSPSVGFVNKIYHPNVDEMSGSVCLDVINQSWSPMFDLVNVFEVFLPQLLLYPNASDPLNCEAAALMMRDRPAYEQRVKEYCEKYAKPEDVGASQEENSIDDEELSEDDYVSSDEAIAGHPDP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0950 184 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 148 IPR000608 -
Bisa11g0950 184 Gene3D Ubiquitin Conjugating Enzyme 1 161 IPR016135 -
Bisa11g0950 184 MobiDBLite consensus disorder prediction 156 172 - -
Bisa11g0950 184 CDD UBCc 7 143 IPR000608 -
Bisa11g0950 184 MobiDBLite consensus disorder prediction 146 184 - -
Bisa11g0950 184 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 29 136 - -
Bisa11g0950 184 SUPERFAMILY UBC-like 4 148 IPR016135 -
Bisa11g0950 184 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 73 89 IPR023313 -
Bisa11g0950 184 SMART ubc_7 4 148 - -
Bisa11g0950 184 FunFam Ubiquitin-conjugating enzyme 5, E2 1 159 - -
Bisa11g0950 184 Pfam Ubiquitin-conjugating enzyme 10 142 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0950 Bisa-ChrBisa11 25886560 25889357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0950 3 150 Miscellaneous Gene Families AT3G17000 24.224 1.78e-06 45.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g0950 11 25886560 25889357 Bisa11g0950 11 25886560 25889357 ECH