Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0945 ATGGGACATGGACACGGTATCACTGCCCAACTTCAACCATTGACCTTCCTCTCAACCTTACTTCCCATGTCCCCTAACATAATCATTGACGATCCCCGAAAAGGATTCCACGACGATGACGTTGTGTATATGCGCGACGATGGATACAACGATGACGGTGAGAGAGAAGCCAAACCCAAAGATTTTAGCAAATTAGAGCTGAAACAGGATCACGAGAATCGTCCACTGTGGGCTTGTGGCAATGGCCGGATATTTCTCGAGACATTCTCCCCTTTATACAAGCAGGCTTACGATTTTCTTATTGCCATTGCGGAACCCGTTTGCAGACCAGAGTCAATGCACGAATACAACCTCACCCCACATTCGCTTTATGCCGCGGTGTCAGTTGGTCTAGAAACAGAAACGATCATATCAGTTTTGAACAAGTTATCCAAGATTATGCTTCCCAAAGAGATGATAAAATTTATACAGGATTCTACTGCGAATTATGGAAAAGTGAAGCTTGTACTTAAGAAAAATCGATACTTAATTGAATCTCCATTTCCAGAGGTATTGAAGACGCTGCTGAGGGATGAAGTTATATCTCGAGCGAGGATCATTTCTGAGGGTGCGACTAGAGATGGATTTACAATCAGCAAAGCAGCAGGTGAAATTGAAGGCACTCACGATGAGTTGCTGAATGAAGTAGAAGTGGCAGCAGCTGCAGAAGAGAAAGAAACTCATTCATTTGAAATTGATCCTTCTCAGGTCGAAAATGTAAAGCAACGATGCCTGCCAAATGCCTTAAATTATCCCATGTTGGAGGAGTATGACTTTAGGAATGATACAGTCAACCCTGACCTTGATATGGAACTAAAGCCTCAAGCACAGCCACGGCCATATCAAGAGAAGAGCCTGAGTAAAATGTTTGGAAATGGTAGAGCAAGATCTGGTATTATAGTTCTCCCTTGTGGTGCTGGAAAATCTCTAGTTGGTGTTTCTGCAGCCTGCCGTATAAAAAAGAGCTGCCTTTGTTTGGCAACAAATGCTGTCTCTGTGGACCAGTGGGCTTTTCAGTTTAAGCTATGGTCAACCATCCGAGATGAAAATATCTGTCGTTTCACATCTGATAGCAAGGAGAGGTTCCGTGGTAATGCTGGAGTGGTTGTGACCACATATAATATGGTTGCTTTTGGTGGTAAACGGTCCGAAGAATCTGAAAAGATCATTGAAGAAATCAGAAACAGAGAATGGGGATTGCTTCTCATGGATGAGGTACATGTGGTCCCTGCACATATGTTTAGGAAGGTCATTAGCATCACTAAATCTCACTGCAAACTTGGGCTCACAGCCACACTTGTGAGAGAGGACGAAAGGATTACAGATCTGAATTTCCTCATTGGTCCAAAGTTATATGAAGCAAATTGGTTAGATCTAGTGAAAGGTGGATTTATTGCTAATGTACAGTGTGCTGAAGTATGGTGTCCAATGACAAAAGAGTTTTTTGCAGAGTATTTGAAGAAAGAGAACTCCAAGAAGAGACAGGCTCTATATGTGATGAATCCAAATAAATTCAGAGCATGCGAGTTTCTCATAAAATACCATGAAACACAGCGTGGTGATAAAATTATAGTCTTTGCTGATAATCTATTTGCTCTCACTGAGTATGCCATGAAACTTCGCAAACCGATGATATATGGTGCTACAAGCCATGTTGAGAGGACAAAAATTCTACAAGCATTCAAAACTAGCAAAGATGTCAACACTATATTCCTTTCGAAGGTGGGTGATAACTCAATTGATATTCCAGAAGCAAATGTGATAATTCAGATCTCTTCACATGCTGGTTCAAGGCGTCAAGAAGCCCAACGTCTTGGTCGTATTCTTAGGGCAAAGGGTAAGCTTCAGGATAGGATGGCTGGGGGTAAGGAGGAGTATAATGCATTCTTCTATTCTCTTGTGTCAACTGATACCCAGGAGATGTACTACTCAACCAAGAGGCAGCAATTTTTAATTGATCAGGGTTATAGCTTTAAGGTAATTACAAGCTTGCATCCAGATGGAGAAGAAGCTTCGTTGAGTTACTATCATCTTGAGGATCAATTGGCACTTCTTGGAAAGGTCTTGAGTGCCGGTGACGATGCAGTTGGCCTAGAGCAATTAGAAGAAGATGCAGACGACATAGCTCTTCACAATGCTCGTCGTTCTACAGGATCAATGAGCGCAATGTCAGGTGCCAAGGGGATGGTTTACATGGAATATGGTACCGGGCGGAACAAAGGTCAAGGACAGATCAAGAGCAAGCCAAAAGATCCATCAAAGCGACACGTTTTATTTAAAAGACGCTATGGAGCACAGTAA 2340 0.4239 MGHGHGITAQLQPLTFLSTLLPMSPNIIIDDPRKGFHDDDVVYMRDDGYNDDGEREAKPKDFSKLELKQDHENRPLWACGNGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKIMLPKEMIKFIQDSTANYGKVKLVLKKNRYLIESPFPEVLKTLLRDEVISRARIISEGATRDGFTISKAAGEIEGTHDELLNEVEVAAAAEEKETHSFEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDENICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKRQALYVMNPNKFRACEFLIKYHETQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILQAFKTSKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLHPDGEEASLSYYHLEDQLALLGKVLSAGDDAVGLEQLEEDADDIALHNARRSTGSMSAMSGAKGMVYMEYGTGRNKGQGQIKSKPKDPSKRHVLFKRRYGAQ 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0945 779 CDD SF2_C_XPB 483 647 - -
Bisa11g0945 779 Pfam Type III restriction enzyme, res subunit 290 446 IPR006935 GO:0003677|GO:0005524|GO:0016787
Bisa11g0945 779 PRINTS Xeroderma pigmentosum group B protein signature 476 498 - -
Bisa11g0945 779 PRINTS Xeroderma pigmentosum group B protein signature 600 625 - -
Bisa11g0945 779 PRINTS Xeroderma pigmentosum group B protein signature 272 298 - -
Bisa11g0945 779 PRINTS Xeroderma pigmentosum group B protein signature 303 325 - -
Bisa11g0945 779 PRINTS Xeroderma pigmentosum group B protein signature 534 556 - -
Bisa11g0945 779 PRINTS Xeroderma pigmentosum group B protein signature 728 747 - -
Bisa11g0945 779 PRINTS Xeroderma pigmentosum group B protein signature 410 430 - -
Bisa11g0945 779 PRINTS Xeroderma pigmentosum group B protein signature 74 94 - -
Bisa11g0945 779 PRINTS Xeroderma pigmentosum group B protein signature 514 529 - -
Bisa11g0945 779 PRINTS Xeroderma pigmentosum group B protein signature 581 599 - -
Bisa11g0945 779 PRINTS Xeroderma pigmentosum group B protein signature 160 179 - -
Bisa11g0945 779 PRINTS Xeroderma pigmentosum group B protein signature 637 660 - -
Bisa11g0945 779 MobiDBLite consensus disorder prediction 750 779 - -
Bisa11g0945 779 PANTHER RAD25/XP-B DNA REPAIR HELICASE 65 747 - -
Bisa11g0945 779 Gene3D - 473 713 IPR027417 -
Bisa11g0945 779 Pfam Helicase conserved C-terminal domain 76 199 IPR032830 -
Bisa11g0945 779 Pfam ERCC3/RAD25/XPB C-terminal helicase 472 720 IPR032438 -
Bisa11g0945 779 Gene3D - 281 472 IPR027417 -
Bisa11g0945 779 CDD DEXHc_XPB 283 452 - -
Bisa11g0945 779 FunFam Probable DNA repair helicase RAD25 281 472 - -
Bisa11g0945 779 NCBIfam DNA repair helicase rad25 61 774 IPR001161 GO:0003678|GO:0006289|GO:0006367
Bisa11g0945 779 FunFam Putative DNA repair helicase rad25 473 715 - -
Bisa11g0945 779 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 248 466 IPR027417 -
Bisa11g0945 779 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 302 464 IPR014001 -
Bisa11g0945 779 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 400 722 IPR027417 -
Bisa11g0945 779 SMART ultradead3 287 468 IPR014001 -
Bisa11g0945 779 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 519 685 IPR001650 -
Bisa11g0945 779 SMART helicmild6 547 625 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0945 Bisa-ChrBisa11 25763128 25770045 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g0945 11 25763128 25770045 Bisa11g0945 11 25763128 25770045 ECH