Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0827 ATGAATACTCAAAACTATAACTGTTTGGAATCAAGCACTACACCTTTGAAGTTTCCTGAAAGATTAAGAAGTCAGATATATAAAGAAGCCTTCTCGATGGGATGCACTTGCTGCAAACAGCGTCTTAGGCATGAAGATCCTGCTGTTCTTGCAACCCAAACCTGTTTTACTATATCTGAAATTGAAGGACTGCATGAGTTGTTCAAGAAGTTTAGTTCTATGGATGATGACGGGCTTATCAGCAAAGAAGAGTTTCAGCTGGGCTTATTTGGAAGTAGCGAGATACGGAGTCTGTTTGCAGACAGGGTCTTTCGTATATTTGACTCAAAAAATGATGGAGTAATAGAATTTGGAGAGTTTGTTCGAGCTCTGAGTGTCTTCCATCCAGCTGCATCTCAGGCTTCAAAAGCAGCTTTCGCATTTCAAATCTATGATTTACGGCAAACAGGCTTCATTCAACGTGAAGAGGTACGAGAGATGATATTGGCACTTCTAAAAGAGTCAGATTTGATTCTTCCCGAAGACATAATTGAGATCATCATTGACAAGACATTTAAAGAAGTGGATTTAAAACGAGATGGAAAGATCGACGCAGAAGAGTGGAAGGAATATACGGCTCAAGACCCATCCTTACTGAAGAATATGACAATTCCATATTTAAAGGACCTTAATACTCAATTTCCTAGAAGAGGATACAAGTAG 702 0.3917 MNTQNYNCLESSTTPLKFPERLRSQIYKEAFSMGCTCCKQRLRHEDPAVLATQTCFTISEIEGLHELFKKFSSMDDDGLISKEEFQLGLFGSSEIRSLFADRVFRIFDSKNDGVIEFGEFVRALSVFHPAASQASKAAFAFQIYDLRQTGFIQREEVREMILALLKESDLILPEDIIEIIIDKTFKEVDLKRDGKIDAEEWKEYTAQDPSLLKNMTIPYLKDLNTQFPRRGYK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0827 233 PANTHER CALCINEURIN B 33 228 IPR045198 GO:0005509|GO:0019722|GO:0019900
Bisa11g0827 233 FunFam calcineurin B-like protein 3 46 231 - -
Bisa11g0827 233 CDD EFh 64 125 IPR002048 GO:0005509
Bisa11g0827 233 ProSiteProfiles EF-hand calcium-binding domain profile. 176 211 IPR002048 GO:0005509
Bisa11g0827 233 PRINTS Recoverin family signature 150 168 - -
Bisa11g0827 233 PRINTS Recoverin family signature 196 216 - -
Bisa11g0827 233 PRINTS Recoverin family signature 103 124 - -
Bisa11g0827 233 SMART efh_1 99 127 IPR002048 GO:0005509
Bisa11g0827 233 SMART efh_1 180 208 IPR002048 GO:0005509
Bisa11g0827 233 SMART efh_1 136 164 IPR002048 GO:0005509
Bisa11g0827 233 SMART efh_1 63 92 IPR002048 GO:0005509
Bisa11g0827 233 ProSiteProfiles EF-hand calcium-binding domain profile. 132 167 IPR002048 GO:0005509
Bisa11g0827 233 SUPERFAMILY EF-hand 48 221 IPR011992 -
Bisa11g0827 233 Gene3D - 46 232 - -
Bisa11g0827 233 Pfam EF-hand domain pair 136 204 IPR002048 GO:0005509
Bisa11g0827 233 ProSiteProfiles EF-hand calcium-binding domain profile. 95 130 IPR002048 GO:0005509
Bisa11g0827 233 Pfam EF-hand domain pair 77 123 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0827 Bisa-ChrBisa11 23486177 23489142 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0827 54 228 EF-hand Containing Proteins AT5G24270 61.364 3.06e-78 232
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g0827 11 23486177 23489142 Bisa11g0827 11 23486177 23489142 ECH