Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0826 ATGAGCTGTTTTTGCTTGAAGAAGGTTCGACAACAAAAGACAAATCACGACCTACTCATCATTCTTGCTTCAGAGACATCTTTCACCCTCAACGAGGTGGAAGCTCTGCGTGACTTGTATAAAAAACTAAGCGCTGCGATCGTTGACGATGGCTTTATTGACAAGGAAGAATTTCGACTCGCACTTTTGGGAAACAGCAGTAAACAGAATTTGTTTGCAGACAAGGTGTTTGATATGTTTGATATGAAGCAAAACGGATTAATTGACTTTGAGGAATTCGTCCGCTCGCTAAGTATATTTCATCCAAATGCACCTAAAGAGAAGAAAATTGCATTTGCATTTAGATTGTTTGATCTTCGGCAAAATGGATACATTGAGCGTGACGAGTTGAAGGAGATGGTCTTGGCCAATCTGACAGAATCAGATGTGACAGTGTCTGATGACATTGTAGAATCAATTGTGAATAAGACAGTAATGGAGGCAGACTCAAAAGGAGATGGAAAGATTGATGAAGAAGAATGGACAGAATTTGTAGAGAAGTATCCCTCTCTTCTGAAGATGATGACTCTTCCATATCTAAAGGATATAACCCTGGCATTTCCCAGCTTTGTATTGCACACCCAAGTAGAAGACTACAAATAA 642 0.3956 MSCFCLKKVRQQKTNHDLLIILASETSFTLNEVEALRDLYKKLSAAIVDDGFIDKEEFRLALLGNSSKQNLFADKVFDMFDMKQNGLIDFEEFVRSLSIFHPNAPKEKKIAFAFRLFDLRQNGYIERDELKEMVLANLTESDVTVSDDIVESIVNKTVMEADSKGDGKIDEEEWTEFVEKYPSLLKMMTLPYLKDITLAFPSFVLHTQVEDYK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0826 213 ProSiteProfiles EF-hand calcium-binding domain profile. 105 140 IPR002048 GO:0005509
Bisa11g0826 213 PRINTS Recoverin family signature 76 97 - -
Bisa11g0826 213 PRINTS Recoverin family signature 169 189 - -
Bisa11g0826 213 PRINTS Recoverin family signature 123 141 - -
Bisa11g0826 213 PANTHER CALCINEURIN B 4 211 IPR045198 GO:0005509|GO:0019722|GO:0019900
Bisa11g0826 213 Pfam EF-hand domain pair 107 178 IPR002048 GO:0005509
Bisa11g0826 213 CDD EFh 73 134 IPR002048 GO:0005509
Bisa11g0826 213 SMART efh_1 153 181 IPR002048 GO:0005509
Bisa11g0826 213 SMART efh_1 109 137 IPR002048 GO:0005509
Bisa11g0826 213 SMART efh_1 72 100 IPR002048 GO:0005509
Bisa11g0826 213 FunFam calcineurin B-like protein 3 19 211 - -
Bisa11g0826 213 Pfam EF-hand domain pair 50 95 IPR002048 GO:0005509
Bisa11g0826 213 SUPERFAMILY EF-hand 23 203 IPR011992 -
Bisa11g0826 213 Gene3D - 21 212 - -
Bisa11g0826 213 CDD EFh 109 178 IPR002048 GO:0005509
Bisa11g0826 213 ProSiteProfiles EF-hand calcium-binding domain profile. 68 103 IPR002048 GO:0005509
Bisa11g0826 213 ProSiteProfiles EF-hand calcium-binding domain profile. 149 184 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0826 Bisa-ChrBisa11 23481186 23486058 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0826 1 211 EF-hand Containing Proteins AT5G55990 55.450 1.04e-83 246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g0826 11 23481186 23486058 Bisa11g0826 11 23481186 23486058 ECH