Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0805 ATGCCGGGTTTGGTATCCGTCAAGACGCCACCGGATGCTCCACCCCTGCGAATTTCGGTGCCCGAAAGTCAAACACCGCAGAGATCGGACTCCGCTAACCTCAAAACGCCCTCTCCTCTTCCGAAGAAACCGCCGTCTCCTTCACCCTCCCGAGGCAAGCCCTCACCGGATCGCAAGAAAAAGCTTCCTGACTCCCCTAACCCGGCTCTTTCCGAGGCCTCCCTCGATAACCCCGATCTCGGCCCCTTCCTTCTCAAGCTCGCCCGAGACACAATTGCCTCCGGTGAAGGTCCGGCAAAGGCTCTCGACTATGCCATTCGGGCCTCCAAATCATTTGAGCGTTGTGCGGTTGAAGGAGAGCCCAGCTTGGACCTCGCTATGAGTTTGCACGTTCTGGCAGCTATTTATTGTAGCTTAGGCAGGTTCGAGGAGGCCGTGCCGGTGCTGGAGCGGGCGATCCAGGTTCCCGACGTCGCCAGGGGTGCGGATCACGCCCTTGCTGCTTTCTCTGGTTATATGCAATTAGGGGATACCTTCTCCATGCTTGGCCAGGTCGACAAGTCGATCTCATGCTATGACGAAGGGCTGAAAGTCCAGATCGAAGCATTGGGTGAGACGGATCCAAGAGTCGGGGAAACTTGCAGATACTTAGCTGAGGCCAATGTTCAAGCAATGCAGTTTGATAAAGCAGAGGAACTGTGCAAAAAAACTCTTGAGATTCATCGTGCACACAGTGAACCAGCATCTCTCGAAGAAGCAGCAGATAGAAGGCTTATGGCACTTATATGCGAGGCAAAGGGAGATTATGAGTCAGCTCTTGAGCACCTTGTCCTTGCCAGCATGGCAATGATTGCAAATGGACAAGACAATGAAGTTGCTGCTATTGATGTCAGTATTGGAAACATTTACATGTCTCTTTGTCGCTTTGATGAAGCTATCTTCTCCTATCAGAAGGCACTTACTGTATTCAAATCATCTAAGGGGGAAAACCACCCTTCAGTTGCATCTGTTTTTGTACGCCTTGCTGATCTGTATCACAGGACTGGAAAACTGAGAGAGTCCAAATCGTATTGCGAAAATGCTCTACGAATTTACTCAAAACCAGTTCCTGGAACCACACCAGAAGAGATTTCTACTGGGTTGACAGAAGTTTCAGCCATTTTTGAATCTGTAGATGAGCCTGAGGAGGCTCTGAAACTCTTGCAAAAGGCGATGAAGTTATTGGAGGATAAACCAGGACAGCATAGCACAATTGCAGGAATAGAAGCACGAATGGGTGTGATGTTTTACATGATAGGGAGGTACGAAGATTCAAGGAACTCTTTTGAGAATGCTGTGGCAAAACTTCGAGCCAGTGGGGAAAGGAAGTCTGCCTTTTTTGGCGTTGTTTTGAACCAGATGGGATTGGCATGTGTACAACTGTTCAAGATAGACGAGGCTGCTGAGTTATTTGAAGAAGCTAGGGGAATCCTTGAACAGGAGTGTGGCCCATGCCATCAAGATACTCTTGGGGTATACAGCAATCTTGCGGCCACTTATGATGCTATGGGAAGAGTTGGAGATGCAATTGAGATCCTGGAGTATGTTCTTAAATTGAGGGAAGAAAAGCTTGGAATAGCAAATCCTGATTTTGAAGATGAGAAGCGAAGGCTAGCTGAGCTTCTGAAAGAAGCAGGCAAGACCCGAGACAGAAAAGCAAAGTCTCTGGAAAACCTCATCGATCCCAGCTCAAAGAGGACAAAGAAGGAGGGGGCAAAGAGGTGGCCTGGCTTGGGTTTTAGAATTTAA 1788 0.4883 MPGLVSVKTPPDAPPLRISVPESQTPQRSDSANLKTPSPLPKKPPSPSPSRGKPSPDRKKKLPDSPNPALSEASLDNPDLGPFLLKLARDTIASGEGPAKALDYAIRASKSFERCAVEGEPSLDLAMSLHVLAAIYCSLGRFEEAVPVLERAIQVPDVARGADHALAAFSGYMQLGDTFSMLGQVDKSISCYDEGLKVQIEALGETDPRVGETCRYLAEANVQAMQFDKAEELCKKTLEIHRAHSEPASLEEAADRRLMALICEAKGDYESALEHLVLASMAMIANGQDNEVAAIDVSIGNIYMSLCRFDEAIFSYQKALTVFKSSKGENHPSVASVFVRLADLYHRTGKLRESKSYCENALRIYSKPVPGTTPEEISTGLTEVSAIFESVDEPEEALKLLQKAMKLLEDKPGQHSTIAGIEARMGVMFYMIGRYEDSRNSFENAVAKLRASGERKSAFFGVVLNQMGLACVQLFKIDEAAELFEEARGILEQECGPCHQDTLGVYSNLAATYDAMGRVGDAIEILEYVLKLREEKLGIANPDFEDEKRRLAELLKEAGKTRDRKAKSLENLIDPSSKRTKKEGAKRWPGLGFRI 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0805 595 FunFam Protein KINESIN LIGHT CHAIN-RELATED 2 455 572 - -
Bisa11g0805 595 SUPERFAMILY TPR-like 289 423 IPR011990 GO:0005515
Bisa11g0805 595 SUPERFAMILY TPR-like 121 274 IPR011990 GO:0005515
Bisa11g0805 595 Coils Coil 544 564 - -
Bisa11g0805 595 Pfam Tetratricopeptide repeat 463 535 - -
Bisa11g0805 595 Pfam Tetratricopeptide repeat 292 366 - -
Bisa11g0805 595 Gene3D Tetratricopeptide repeat domain 460 573 IPR011990 GO:0005515
Bisa11g0805 595 SUPERFAMILY TPR-like 417 561 IPR011990 GO:0005515
Bisa11g0805 595 Pfam MalT-like TPR region 130 280 IPR041617 -
Bisa11g0805 595 MobiDBLite consensus disorder prediction 560 589 - -
Bisa11g0805 595 MobiDBLite consensus disorder prediction 38 52 - -
Bisa11g0805 595 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 33 577 - -
Bisa11g0805 595 Gene3D Tetratricopeptide repeat domain 280 459 IPR011990 GO:0005515
Bisa11g0805 595 ProSiteProfiles TPR repeat profile. 293 326 IPR019734 GO:0005515
Bisa11g0805 595 MobiDBLite consensus disorder prediction 560 595 - -
Bisa11g0805 595 MobiDBLite consensus disorder prediction 1 75 - -
Bisa11g0805 595 SMART tpr_5 126 159 IPR019734 GO:0005515
Bisa11g0805 595 SMART tpr_5 169 202 IPR019734 GO:0005515
Bisa11g0805 595 SMART tpr_5 253 286 IPR019734 GO:0005515
Bisa11g0805 595 SMART tpr_5 293 326 IPR019734 GO:0005515
Bisa11g0805 595 SMART tpr_5 211 244 IPR019734 GO:0005515
Bisa11g0805 595 SMART tpr_5 503 536 IPR019734 GO:0005515
Bisa11g0805 595 SMART tpr_5 461 494 IPR019734 GO:0005515
Bisa11g0805 595 SMART tpr_5 378 411 IPR019734 GO:0005515
Bisa11g0805 595 SMART tpr_5 335 368 IPR019734 GO:0005515
Bisa11g0805 595 SMART tpr_5 419 452 IPR019734 GO:0005515
Bisa11g0805 595 Gene3D Tetratricopeptide repeat domain 84 279 IPR011990 GO:0005515
Bisa11g0805 595 MobiDBLite consensus disorder prediction 20 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0805 Bisa-ChrBisa11 23196546 23199673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0805 132 338 Glycosyltransferase AT3G04240 24.268 1.17e-06 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g0805 11 23196546 23199673 Bisa11g0805 11 23196546 23199673 ECH