Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0802 ATGGCATCTCCATCGACTCCGAGCTTCTCAGCTTCTTTCTGTTCCACTAGGACCCAATTCACTCGCATCGCACGCTTCCCCTCCGTCACCTTGCCTCAGTTTCGCAAAAACCAAACGCTCTCTTTAACTCGTCGACTTGTCGTATCATCCCGTCTCAATTCGTCTAAATCCTCTGATGCTGGTGGCTCTGTCTCGCCTGACAGTGGAGATTTACCCTACGAGCTCCAGCACGATTCTTCGCCTCAGCGTCAGAGGCGCGGATCGCCGGTATTCGTCACGCTCCCAGTGAATGCTGTGGGCCCAGAGGGGCAGGTCCGAAGGCTGAAAGTTATAACGGTTTCGCTCTTGGCGCTTGCGAATGCTGGAGTAGAAGGCGTGGTTTTGGAGATTTGGTGGGGTTTAGTTGAGAGGAATGAGCCTAGGGTTTATAATTGGCGAGGGTACTGGGAACTCGTCATGTTGGCTCGGAGGTGCGGCCTGAAGGTTCGGGTTGTCCTTGCTTTTCATCAGTGCGGCACGGACTCTGCTGATCCTAATTGGATACCTCTTCCTCAATGGGTACTTGATGAGATAAAAAAGGATCCAGATTTAGTGTATTCGGACAAGTTAGGGAGAATAAGTACTGAATACATTTCGCTTGGATGTGATATGCTTCCTGTGCTGTGTGGACGATCTCCCATTCAAGCATATGCTGATTTTATGAGGAACTTCAGGGACACCTTCAAGCCTTATTTTGGCATTGTCATAACAGGAGTACAAATTGGTATGGGTCCTGCTGGTGAACTAAGATATCCTGTACACCCTTCCCAGAAGTTAATACCAGCTTGGCCCCACGAACTTGGAGATTTTCAATGCTATGACAAGTATATGCTTGCATCTCTAAATGCTTGTGCAAGAGAGATTGGAATGCCTGAATGGGGATATGTTGCTCCACATGGTGCTGGAAATTTCAGGCGCAATCCTGAGCATACTTTGTCTTTTAGAAGTCAGGATAGTTCTTGGAACTCACCACAGGGCAAGTTTTTTCTTGAATGGTACTCGGGGATGCTGCTACTGCATGGAGAGAGAATTTGTAGGGAAGCTGAAACTATATTTAGGGGTACAGAAGTCAATATGTCAGCAAAAGTGGCTGCCATTCACAGGCACTATATGATGGACTCTCTTTCATCAGAGTTAATGGCAGGCTATTACAATACTTCTAAAAGGGATGGATACTTACCCATTGCTCGCATGTTTAGTAAGTACGGATTTAGCATATGTTGCTCATGTTTTGAAATGCAAGATGCAGCAGCAAATAAGAGAAACCCATATGGTGGCCCTGAAGGTTTTCTGGGACGGCTGTTGTTGGCTGCTAGGCTTTGTGACATACCACTGGAAGGTCAGAACTTTTCAACTAATTTTAATGATATGTCATTCGAGCAGGTGCTGAAGATGTCAAAGTTTTACTCAGACGGGTTTGAAAAGCGTCCCTTCTCATTCAACTTTGTGAGAATGGACGGGAGAATGTTTGAATCTCGTTTTTGGGATCGATTTACTCGTTTTGTAAGGCAAATGTCTGATGGGAATAGCTTTCGAGCAAGATTAAACTGTGTTAGTGATGCACGTTTGAAGTCCACATCAGGGGTAGCAGAAGTGGGACTGTTTTACCAGCACTGTTAA 1659 0.4599 MASPSTPSFSASFCSTRTQFTRIARFPSVTLPQFRKNQTLSLTRRLVVSSRLNSSKSSDAGGSVSPDSGDLPYELQHDSSPQRQRRGSPVFVTLPVNAVGPEGQVRRLKVITVSLLALANAGVEGVVLEIWWGLVERNEPRVYNWRGYWELVMLARRCGLKVRVVLAFHQCGTDSADPNWIPLPQWVLDEIKKDPDLVYSDKLGRISTEYISLGCDMLPVLCGRSPIQAYADFMRNFRDTFKPYFGIVITGVQIGMGPAGELRYPVHPSQKLIPAWPHELGDFQCYDKYMLASLNACAREIGMPEWGYVAPHGAGNFRRNPEHTLSFRSQDSSWNSPQGKFFLEWYSGMLLLHGERICREAETIFRGTEVNMSAKVAAIHRHYMMDSLSSELMAGYYNTSKRDGYLPIARMFSKYGFSICCSCFEMQDAAANKRNPYGGPEGFLGRLLLAARLCDIPLEGQNFSTNFNDMSFEQVLKMSKFYSDGFEKRPFSFNFVRMDGRMFESRFWDRFTRFVRQMSDGNSFRARLNCVSDARLKSTSGVAEVGLFYQHC 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0802 552 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 25 525 IPR001554 GO:0000272|GO:0016161
Bisa11g0802 552 Gene3D Glycosidases 78 543 - -
Bisa11g0802 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 165 186 IPR001554 GO:0000272|GO:0016161
Bisa11g0802 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 405 428 IPR001554 GO:0000272|GO:0016161
Bisa11g0802 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 370 386 IPR001554 GO:0000272|GO:0016161
Bisa11g0802 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 387 398 IPR001554 GO:0000272|GO:0016161
Bisa11g0802 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 334 353 IPR001554 GO:0000272|GO:0016161
Bisa11g0802 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 143 161 IPR001554 GO:0000272|GO:0016161
Bisa11g0802 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 257 279 IPR001554 GO:0000272|GO:0016161
Bisa11g0802 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 122 136 IPR001554 GO:0000272|GO:0016161
Bisa11g0802 552 MobiDBLite consensus disorder prediction 53 86 - -
Bisa11g0802 552 Pfam Glycosyl hydrolase family 14 92 514 IPR001554 GO:0000272|GO:0016161
Bisa11g0802 552 SUPERFAMILY (Trans)glycosidases 87 539 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0802 Bisa-ChrBisa11 23133373 23136258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0802 89 525 Glycoside Hydrolase AT4G17090 47.260 1.88e-144 426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g0802 11 23133373 23136258 Bisa11g0802 11 23133373 23136258 ECH