Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0606 ATGGCCGCGTCGCCATCTACTGCGGTCACCACCAATATCATGCTTGCCATCTTCGAGAAGAAGACGAACCCAGTAGATCTCTATCGCCCTCTTCGCAACTACGTCGCTTACCACTACTCCGAACGCGAGGCCCAGAACCTCGAAGACGACCTCCAAACCCTTAAGCAACTTCGTTCCGACCTCGAGCGCCACTCTGACCCTTCCCTGACCTCTCGCCGTGACCTCCTCCAATCCTACTACAAAGCTCTCTGCCTTGTTGAGACCCGTTTTCCCATATCCCCTGACCCAGATCACGTCAACACTCTCAGTTTTGTGTGGTTTGATGCGTTTAAGCCCAAACAGAAGGCGACGCAGCAGAATATTCACCTCGAGAAAGCCGCAGTGCTGTTCAATTTGGGTGCAGTTTACAGTCAGATTGGGCTGTCCTATGATCGGAATACCGTTGATGGCCGGAGGCAGGCCTCGCATGCGTTTATTGCAGCTGCTGGGTCGTTTGCCTACTTGAGGGATAATGCGGCGATGAAGGCATCAATTGGGAGTTCCACAACAGTGGATATGTCAGTCGAGTGCGCTGGTACGTTGGAGAGGTTGATGCTGGCTCAAGCACAAGAGTGCGTGTTTGAGAATACCATTGCAAAAGGGAGCACCCCGGGGGTTTGTTCGAAGATCTCTAGGCAGGTTGGGCTATACTATGAGGAAGCTTTAGCTGCATTGAACGTTGCACCTTTGAACCAGCATTTTGATAAGTCATGGATAGCTCATGTGCAGCTGAAGGCAGTTCTATTCTTTGCAGAATCTTGCTATAGGTATGGATTAGAGCTGCATGAGAAAGAAGAGATAGCAGAGGAGATCGCACGACTGAGGAGTGGGGTTAATGCACTAAACGAGGCAAAGAAAAACTCAAAGGGTGCTGCAGCACAAATCCTAGATGCAATTAGTAAGGTTGAGGCCAATATTAACCGAAACCTGGAAAGAGCTGTCAAAGAGAATGATAGAGTTTACCTCATGAGGGTTCCTTCGCCCAATTCCTTACCGCCACTTCCTGCATTTTCCATGGTGAAGCCAATGTTGATGAGTGAAGTATTAGATGCAAGCAAAGAAAAAATGTTTGCAAGTCTTGTTCCTGATAGCAGTGCAAAGGCTCTCTCTAGGTACTCTGAAATGGTCGATGTAATTATAAGAATGCAAGCTGAAAAATTACAACAAGCTAGTGAGTTAACCCGAGTTAGGCTTAAGGAAATGGAGCTGCCTGATTCCATTCTTGCTTTGGAAGGAAATTTTATTTTACCAACACATCTCAAAGAAGATGTGGAGGCCGTGCAGATCAGTGGGGGTCCTGCTGGATTGGAAGCAGAGTTACAGCAACTTAAGGACCTTAGGAGGGTGAATCAAGAACTATTGGTCCAGACTGAGGAGCTGCTGCAGAAGGAAGCCCGAGAAGATGCTCAATTTAGAAGCCAATTTGGAACAAAGTGGACTAGGCCTCAGTCAAGCACTTTGACAAAGAACATGCAGGATAGGTTAAATAGGTTTGCAGGTAACTTGAAGCAAGCCGCAGAAAGTGATGGTCGGATTGACCGTTCAGTGAGAGAACATTCAGCACTCATGTCAATCCTTGACAGCCGTCCGATTGAATCTGCGCTTCCTTCCTTGGCAAGGCCGATAATGTCTTTGGATGCCAATGAAGATGCTATTGTGGGGTCCCTCAAGCAGAGCTTGAGGCAGCTAGAAACTCTGGGAGCTCAAAGGGCTGGTCTTGAAGACATGCTTAAAGAGATGAAAAGAAAGGATGATATACTACCTAAATTGATGACATCAACTGGCTCTTATGAGGATCTTTTCAAGAAAGAGATAGCAAAATATGACCATATTTGTGAAGAGATAGCTCAAAATATTGAGGCACAAGAGCAGTTGTTGCTGCAGATCCAGGCTCAAAATGATGAGTTCTCTGCTATCTTTAATCTTGAAGATTACAAAGCTTCACGTGAAAAATCCTACAAGCAAATTGAAGCTGCTGTAGCTAAGTATCGAGAAATAAAAGACAACATCAATGAAGGGTTGAAATTTTATGTTACACTGCAGGATGCAATCACCAATGTAAAGCAGCAGTGCAGTGACTTTATAATGACCAGAAACATCCAGAGCAGGGACATGATTGAAGATGTTCAGAGACAAGTGGCTGGTCTCAGTTTCCAAGATAACAAAACTACAGGTCCTTCAAACAGCAACTACTCTTCAATGGGGCACCAAACCCAAAGATCCTATCCACCACAAACAGATTCTCGCCCCCAAAATCCATATTATCAACCACCTACGCAGCCACCGGTGGCTGGGTATGTTCAACCCCCTCCTCCATATGGTTCTGCACATCAGCCTCCTCCTCCGTACCACATTCCGCACACATCAGCTACTCCATACCCTCCTTCTCAGGTCCACCAGCAGCCACCAGCAAGCCATGACTATGGCCAGCCTCCATATCCTGGATGGCGTGGTCCGTATTATAATGCACATGCACAGCAACCTACATCGGTTCCTCAGCCTCCTTACACCATTCCAGGTCCATATCCTCCTCCTCACCAAAGTGGCTACTATAAGCAGCAATAG 2604 0.4677 MAASPSTAVTTNIMLAIFEKKTNPVDLYRPLRNYVAYHYSEREAQNLEDDLQTLKQLRSDLERHSDPSLTSRRDLLQSYYKALCLVETRFPISPDPDHVNTLSFVWFDAFKPKQKATQQNIHLEKAAVLFNLGAVYSQIGLSYDRNTVDGRRQASHAFIAAAGSFAYLRDNAAMKASIGSSTTVDMSVECAGTLERLMLAQAQECVFENTIAKGSTPGVCSKISRQVGLYYEEALAALNVAPLNQHFDKSWIAHVQLKAVLFFAESCYRYGLELHEKEEIAEEIARLRSGVNALNEAKKNSKGAAAQILDAISKVEANINRNLERAVKENDRVYLMRVPSPNSLPPLPAFSMVKPMLMSEVLDASKEKMFASLVPDSSAKALSRYSEMVDVIIRMQAEKLQQASELTRVRLKEMELPDSILALEGNFILPTHLKEDVEAVQISGGPAGLEAELQQLKDLRRVNQELLVQTEELLQKEAREDAQFRSQFGTKWTRPQSSTLTKNMQDRLNRFAGNLKQAAESDGRIDRSVREHSALMSILDSRPIESALPSLARPIMSLDANEDAIVGSLKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYEDLFKKEIAKYDHICEEIAQNIEAQEQLLLQIQAQNDEFSAIFNLEDYKASREKSYKQIEAAVAKYREIKDNINEGLKFYVTLQDAITNVKQQCSDFIMTRNIQSRDMIEDVQRQVAGLSFQDNKTTGPSNSNYSSMGHQTQRSYPPQTDSRPQNPYYQPPTQPPVAGYVQPPPPYGSAHQPPPPYHIPHTSATPYPPSQVHQQPPASHDYGQPPYPGWRGPYYNAHAQQPTSVPQPPYTIPGPYPPPHQSGYYKQQ 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0606 867 SMART BRO1_2 13 397 IPR004328 -
Bisa11g0606 867 Pfam BRO1-like domain 14 392 IPR004328 -
Bisa11g0606 867 Coils Coil 576 596 - -
Bisa11g0606 867 MobiDBLite consensus disorder prediction 845 859 - -
Bisa11g0606 867 Coils Coil 625 645 - -
Bisa11g0606 867 MobiDBLite consensus disorder prediction 763 802 - -
Bisa11g0606 867 MobiDBLite consensus disorder prediction 730 867 - -
Bisa11g0606 867 Coils Coil 449 476 - -
Bisa11g0606 867 Gene3D alix/aip1 like domains 7 374 IPR038499 -
Bisa11g0606 867 Gene3D alix/aip1 like domains 421 702 - -
Bisa11g0606 867 PANTHER PCD6 INTERACTING PROTEIN-RELATED 13 866 - -
Bisa11g0606 867 Gene3D alix/aip1 in complex with the ypdl late domain 375 653 - -
Bisa11g0606 867 CDD V_Alix_like_1 375 711 - -
Bisa11g0606 867 MobiDBLite consensus disorder prediction 803 817 - -
Bisa11g0606 867 CDD BRO1_Alix_like_1 14 369 - -
Bisa11g0606 867 Coils Coil 277 297 - -
Bisa11g0606 867 ProSiteProfiles BRO1 domain profile. 12 407 IPR004328 -
Bisa11g0606 867 Coils Coil 37 64 - -
Bisa11g0606 867 MobiDBLite consensus disorder prediction 730 762 - -
Bisa11g0606 867 Pfam ALIX V-shaped domain binding to HIV 429 713 IPR025304 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0606 Bisa-ChrBisa11 16787080 16797954 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g0606 11 16787080 16797954 Bisa11g0606 11 16787080 16797954 ECH