Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa11g0447 ATGGAATCCAAGGCTCTGCGATTCATCAGGTACCAATCTATATTCTCGACCGTTCGATCTGGAGACTTCGACGGGCTGAAGCAACTCGTGGAGCAGCTCAAGAAGGACGATGCGGCGTCGCTTTGTGATGTGATGTCCCTCCAGAACGATGCTGGGGAGACGGCGCTGTACATCGCCGCTGAGCATAATCTTAGTGAAATTTTCAGATACTTGCTCAAGTTCTGTGACTTGGAGGTGGTCAAGATCAGGTCCAAATCTGATATGAACGCCTTTGATGTAGCTGCGAAGCGGGGTCATTTAGATATTGTGAAGGAGTTTTTGAACATTTTGCCTGAGGTTTGTAAGCTATGCGACTCCTCAAACACTAGCCCCCTATATTCAGCTGCTGTTCAAGAACATTTGGATGTGGTGAATGCTATCTTGGATGCTGATGTCAGTTCAATGTGGATAGTTAGGAAAAATGGAAAAACTGCATTGCATAATGCTGCTAGGTATGGCCTTCTTCTTATTGTAAAGGCACTTATTGACCGAGATCGAGGAATAGTCTGTGTCAAAGATAAAAAGGGTCAAACTGCACTGCATATGGCTGTAAAAGGGCAGAGTCCTTCAGTGGTGGAGGAGATATTACAAGCTGATTCCACAATATTGAATGAACGAGATAAGAAGGGAAATACAGCTCTACACATGGCTACAAGGAAGGGCCGTTCACAGATTGTGTGTCTTTTGCTAGCCTATACGGTTATGAATGTCAATGCTATCAATAACCAGAAGGAAACAGCATTGGATTTAGCAGATAAACTGCAGTATGGGGATTCAGCTCTGGAAATCAAGGAAGCCCTTGCAGATTATGGTGCCAAGTATGCCAGGCAAGTTGGCAAAGCTGATGAAGCTATGGAACTTCAAAGGACTGTGAGTGATATAAAGCATGAGGTCCAATCACAACTGGAGGCAAATGAAAAAACTCGCAGACGAGTTTCTGGCATAGCTAAAGAACTGAAAAAGCTTCACAGAGAAGCAGTTCAAAATACAATTAACTCTGTCACAGTTGTTGCTGTCCTTTTTGCCTCGATAGCATTCTTGGCTATATTCAATTTGCCTGGTCAATATGTCAAGAACGGACCAGAGTCGGGGAAGGCCAATATCGCCGATAATGTAGCTTTCCAAGTTTTCTGCCTTTTAAATGCTACATCTCTTTTCATCTCTCTATCGGTCGTTGTAGTTCAAATCACTTTGGTAGCCTGGGACACAAGGGCTCAAAAGCAGGTTGTTTCAGTGGTTAACAAGCTAATGTGGGCTGCAGGGGCATGCACATGTGGGGCTTTTCTGGCTTTAGCTTTTGTGGTTGTTGGAGAGCGAACATGGATGGCTATTACCATAACCCTTTTGGGAGTACCGATCCTAGTTGGAACTCTAGCCTGTCTGTGCTACTTTGTTTTTCGACAGCATTTTGGCATTTTCCGCAGCGATTCCCAGAGACGCATCAAGAGAGCAAGTGGAAGCAAATCCTTCTCGTGGTCGTACTCGGCAAATATATCAGATTTGGATGAATATGATTCTGACATCGAGAAGATTTATGCTCTGTAA 1584 0.4419 MESKALRFIRYQSIFSTVRSGDFDGLKQLVEQLKKDDAASLCDVMSLQNDAGETALYIAAEHNLSEIFRYLLKFCDLEVVKIRSKSDMNAFDVAAKRGHLDIVKEFLNILPEVCKLCDSSNTSPLYSAAVQEHLDVVNAILDADVSSMWIVRKNGKTALHNAARYGLLLIVKALIDRDRGIVCVKDKKGQTALHMAVKGQSPSVVEEILQADSTILNERDKKGNTALHMATRKGRSQIVCLLLAYTVMNVNAINNQKETALDLADKLQYGDSALEIKEALADYGAKYARQVGKADEAMELQRTVSDIKHEVQSQLEANEKTRRRVSGIAKELKKLHREAVQNTINSVTVVAVLFASIAFLAIFNLPGQYVKNGPESGKANIADNVAFQVFCLLNATSLFISLSVVVVQITLVAWDTRAQKQVVSVVNKLMWAAGACTCGAFLALAFVVVGERTWMAITITLLGVPILVGTLACLCYFVFRQHFGIFRSDSQRRIKRASGSKSFSWSYSANISDLDEYDSDIEKIYAL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa11g0447 527 SMART ANK_2a 86 115 IPR002110 GO:0005515
Bisa11g0447 527 SMART ANK_2a 188 217 IPR002110 GO:0005515
Bisa11g0447 527 SMART ANK_2a 120 149 IPR002110 GO:0005515
Bisa11g0447 527 SMART ANK_2a 154 183 IPR002110 GO:0005515
Bisa11g0447 527 SMART ANK_2a 222 252 IPR002110 GO:0005515
Bisa11g0447 527 SMART ANK_2a 51 79 IPR002110 GO:0005515
Bisa11g0447 527 Coils Coil 318 338 - -
Bisa11g0447 527 SUPERFAMILY Ankyrin repeat 14 285 IPR036770 -
Bisa11g0447 527 Pfam Domain of unknown function 338 447 IPR026961 -
Bisa11g0447 527 Pfam Ankyrin repeat 223 255 IPR002110 GO:0005515
Bisa11g0447 527 ProSiteProfiles Ankyrin repeat region circular profile. 222 243 - -
Bisa11g0447 527 Gene3D - 149 306 IPR036770 -
Bisa11g0447 527 ProSiteProfiles Ankyrin repeat profile. 154 177 IPR002110 GO:0005515
Bisa11g0447 527 ProSiteProfiles Ankyrin repeat region circular profile. 154 177 - -
Bisa11g0447 527 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 19 506 - -
Bisa11g0447 527 Pfam Ankyrin repeats (3 copies) 21 107 IPR002110 GO:0005515
Bisa11g0447 527 Pfam Ankyrin repeats (3 copies) 126 211 IPR002110 GO:0005515
Bisa11g0447 527 Gene3D - 10 148 IPR036770 -
Bisa11g0447 527 ProSiteProfiles Ankyrin repeat profile. 222 255 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa11g0447 Bisa-ChrBisa11 9711354 9716746 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa11g0447 1 527 Miscellaneous Gene Families AT2G01680 70.391 0.0 734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g0447 11 9711354 9716746 Bisa11g0447 11 9711354 9716746 ECH