Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0393 ATGGAACGCAAGAAAACGCTGACCTGGAGAGGCCTCGGAGATGACGACGACGACACGTTCTTCGAGAGCTTCGAAGCCGCCAACTACGGCGCTTCCTCCTCCTCCGATGAGGACGAAGAGTTCTTAGACAGCCGCATGTCCTTTTCCGCTCGATCTCGGAGATTCTCAATTATGTCGAGAAAAGCTTCAACGGCGGCCGTAACATTCGCGATCCCGGAGTTCGAAGACGGCGCAGGCGCTGGCGTCCCGCTGTTGTCGCCTTCCAAGTCCATCGCCGCTCGATCTCAGAGATTCAGAATTATGTCGAGAAAAGGGTCAACGGCGGCGGTAGCAGTACCGATGCCGGATATCGAAGACGACGGCGGAGGCGGAGCCCTCGCAGCTCCGGCGCCTGTGCCGCCCTCCGTGTCCATCGCCGCTCGATCTCAGAGATTCAAAATTATGTCGAGAAAAGCGTCAACGGCGCACGTCGCAGTGGCGTTCCCGGACTTCGACTACGACATATGGATGTCTTCGCCTGGATCGATCACAGAGCGCAGGAAGAAATTGCTCGACGGTATGGGCCTAGACGAGAACAAGGAGCTTCTAAAGATGGCGAGCGTCGCAATCGGCCGTGCGATGACGAGGAAATTCGACAATGCTGCGGCTAATTCTGAATCTGCTCCGTCGTCTGAGTCCAAAGTTTGCGATTCCGATGCCGATTCATCTTCCGTGCCAAAAGTTCCTGACTCTGCTGCTCCTCTTCCTCTTCCTCCTCGTCCTCGTGCTACTCCCGGTGCTCCTGCTGCTGATTCTGCTGAAACTGCTGAAACTGCTAAAACCGCTGAAACTACTAAAACTGCTAAAACTGCTGCTGCTCCTGATGCTGCTCCTCCTGCTGCTGCTCCTCCTGCTGCAGTCTCTGCATCGGAGGAACAGAAGGAAGCCGTGGAACAGAAGGTACCGAGCACACATCAGCTCTCTGTTCCATTCGTTCTCGTCAGGTCGCGTTCCAATGGAGATGTAGAAGCCGATTCGTGCAAACACAGAAAAGAGGAATTGATAGGTAAGATATCGAAGCAGCGTCTGACAAGAACATTGTCGGAGATCTGTCTGGCTCGTCCTCGCATGTGTCCCTACGCCTACTGGACCCCCGCCTTGCCGAAAGACGACATCGATTTCGCTTTTTCCTGGGACCAAGACCAACCATCTAAGCGCAAAAGAGGAAGAAAGCTGACCACCGTCATCTCCAACACCGGCTTCGGCTCCTTCTTCGTCATCAAGAACCTGGACACCGGCAAGGAGTTCATCGTTACCGGCAAGGACCCCGGCGTGGCCGGCACGTGGAACAGTCTAAACGACCTGGAGACAGGGAAGAAGCTGACGTTGGAGGAGTTCGAGAAGTCGGTGGGGCACTCCCCGCTGGTGAAGGAGCTCATGCGACGAGGCAGAGGCAAAAACGACGCCAGCAAGCTGAGCTCCAGCAGTTATATCTCCAAGAGCTTGAGGATGAGCAAGAAAACAGGGGCTGCTCTGTTGAAGAACGTGAAGGGCGTGGCCAGTGGGTTCTTTGGGGAAAGAGAGAGATCAGAGGGAAGTACCAAAGATCAGAATCAGACCACCCCTCCGAATCTACCGCCCGTGCCACCACCGGCGAATAACACGGCAGAGCCGAAGGAGAAACAGAACAAGAACGATTGGGTCAAGGTGAGGCAGAGTGGGAAATCTCAGAAGGAGCTCTCAGCGTTACATTTGTGTCAGGAGTTTCAGGCACATGAGGGGTGTATCTGGACGATAAAGTTCAGTTTGGATGGGCGTTATTTGGCGAGTGCTGGGGACGACAAGGTGATTCATGTGTGGGAAGTGCAGGAGTGTGAGCTCACGTCTTTGACGCAGGAAGAAGGGAATCTTACGCCCCTCATTGCGTCGTCGGCGGCACAGGAGGGGGCCGAGAAGAAGGGCAAGACTGCGAATAATCAGGTTCCGCAGTACGTCCATGCGCCCGGAACTGTATTCTCCCTTTCTGAGAAGCCGCTTTGCACTTTCACGGGTCATTCCGATGACGTTCTGGATTTGTCTTGGTCCAAAACTCAGCAACTACTCTCATCTTCAATGGATAAAACGGTGAGATTATGGAACTTGGAATCGAAGACGTGCTTGAAGGTGTATACCCATAATGACTATGACGAAGATTATTTCATTAGTGGCTCCCTTGATGCAAAGGTTAGAATATGGAGCGTCCCTAAACGACAAGTCGTTGACTGGACTGACGTCCATGAGATGGTCACTGCTGTTTCTTACACTCCTGACGGTCAGGCAGCTCTTGTTGGTACACATAGTGGGACTTGTTGCGTATATAGTGCAGAAGAGAGTAAATTAACTCAGACGGGCAAAATTGATTTACAACAGAGAAAGGGAGCTCTTCTGAAAAAGATAACTGGTTTTCAGTTTGCACCAGGGACTCCCTCAGAAGTGCTTGTGACTTCAGCTGATTCCAGGGTTAAAGTTGTGGAGAACGCAAAAGTTGTTCATAAATTCCAAGGCGATCCCTCACAATCCTTAGCCCGTAACACTACCTCCGATCCCCCTCCCAAAAAACCACCTCTTCCTAATAAGAAAACCAAGGACGACAATGCCACCACTGAGAGTGCCTCAGTTCCCCCGGACAGTAATTCATCGGCTTGTCCGCCAGAGGATGCCGACCCCAAGGCAACATCCCAAACCGATGGGGTTGCCGATTCGTTCGCCTCCAATGATTCCTCCACAAAGAACGATGATCCCTCTGCTACCAGTACATCATCCTCTTCTTCTTCGTCTTCCTCTGCTACGACCAAGTCTGATAGTAATCAAAGTGCCACGTTAGAATATCCTGCATGGGGATTGGTAATTGCAACTGCTAGCATAGGTGGTGAAATAAGGTGTTATCAAAATTTTGGTCTGCCTAGAAAAGTTAGATGTATACATGCAATATATGGATCACTGTACGAGGAGTATGGAGAGAATTTTGTGGACATGTTGGATGGCATATTTTCGTTTGTGCTCTTGGATACTTGCTCAAGATGCCAGTGGGATAACGTAACATCCCTCTACATTGACAAGGGAGAAGATGGAGAGATAAAGGATTTTTCTGATGATACAATTGGACAATACTCATTCTTTGAGGCCATTCCTTTAACCCAAGACAACCCCATGGTTCTAATATGTGATGACTTTGACTCTTTAACCTTCAACTTTGAGTTCTGA 3222 0.5096 MERKKTLTWRGLGDDDDDTFFESFEAANYGASSSSDEDEEFLDSRMSFSARSRRFSIMSRKASTAAVTFAIPEFEDGAGAGVPLLSPSKSIAARSQRFRIMSRKGSTAAVAVPMPDIEDDGGGGALAAPAPVPPSVSIAARSQRFKIMSRKASTAHVAVAFPDFDYDIWMSSPGSITERRKKLLDGMGLDENKELLKMASVAIGRAMTRKFDNAAANSESAPSSESKVCDSDADSSSVPKVPDSAAPLPLPPRPRATPGAPAADSAETAETAKTAETTKTAKTAAAPDAAPPAAAPPAAVSASEEQKEAVEQKVPSTHQLSVPFVLVRSRSNGDVEADSCKHRKEELIGKISKQRLTRTLSEICLARPRMCPYAYWTPALPKDDIDFAFSWDQDQPSKRKRGRKLTTVISNTGFGSFFVIKNLDTGKEFIVTGKDPGVAGTWNSLNDLETGKKLTLEEFEKSVGHSPLVKELMRRGRGKNDASKLSSSSYISKSLRMSKKTGAALLKNVKGVASGFFGERERSEGSTKDQNQTTPPNLPPVPPPANNTAEPKEKQNKNDWVKVRQSGKSQKELSALHLCQEFQAHEGCIWTIKFSLDGRYLASAGDDKVIHVWEVQECELTSLTQEEGNLTPLIASSAAQEGAEKKGKTANNQVPQYVHAPGTVFSLSEKPLCTFTGHSDDVLDLSWSKTQQLLSSSMDKTVRLWNLESKTCLKVYTHNDYDEDYFISGSLDAKVRIWSVPKRQVVDWTDVHEMVTAVSYTPDGQAALVGTHSGTCCVYSAEESKLTQTGKIDLQQRKGALLKKITGFQFAPGTPSEVLVTSADSRVKVVENAKVVHKFQGDPSQSLARNTTSDPPPKKPPLPNKKTKDDNATTESASVPPDSNSSACPPEDADPKATSQTDGVADSFASNDSSTKNDDPSATSTSSSSSSSSSATTKSDSNQSATLEYPAWGLVIATASIGGEIRCYQNFGLPRKVRCIHAIYGSLYEEYGENFVDMLDGIFSFVLLDTCSRCQWDNVTSLYIDKGEDGEIKDFSDDTIGQYSFFEAIPLTQDNPMVLICDDFDSLTFNFEF 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0393 1073 MobiDBLite consensus disorder prediction 552 566 - -
Bisa10g0393 1073 MobiDBLite consensus disorder prediction 517 566 - -
Bisa10g0393 1073 Gene3D - 720 884 IPR015943 GO:0005515
Bisa10g0393 1073 MobiDBLite consensus disorder prediction 214 233 - -
Bisa10g0393 1073 ProSiteProfiles Trp-Asp (WD) repeats profile. 675 715 IPR001680 GO:0005515
Bisa10g0393 1073 MobiDBLite consensus disorder prediction 900 943 - -
Bisa10g0393 1073 Pfam WD domain, G-beta repeat 580 613 IPR001680 GO:0005515
Bisa10g0393 1073 Pfam WD domain, G-beta repeat 670 706 IPR001680 GO:0005515
Bisa10g0393 1073 MobiDBLite consensus disorder prediction 470 490 - -
Bisa10g0393 1073 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 675 709 - -
Bisa10g0393 1073 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 582 616 - -
Bisa10g0393 1073 MobiDBLite consensus disorder prediction 838 943 - -
Bisa10g0393 1073 Gene3D - 561 719 IPR015943 GO:0005515
Bisa10g0393 1073 PRINTS G protein beta WD-40 repeat signature 693 707 IPR020472 -
Bisa10g0393 1073 PRINTS G protein beta WD-40 repeat signature 601 615 IPR020472 -
Bisa10g0393 1073 PRINTS G protein beta WD-40 repeat signature 726 740 IPR020472 -
Bisa10g0393 1073 ProSiteProfiles Trp-Asp (WD) repeats profile. 582 623 IPR001680 GO:0005515
Bisa10g0393 1073 SUPERFAMILY WD40 repeat-like 576 842 IPR036322 GO:0005515
Bisa10g0393 1073 PANTHER WD REPEAT DOMAIN 44 15 842 IPR040324 -
Bisa10g0393 1073 ProSitePatterns Trp-Asp (WD) repeats signature. 601 615 IPR019775 -
Bisa10g0393 1073 MobiDBLite consensus disorder prediction 244 258 - -
Bisa10g0393 1073 SMART WD40_4 709 739 IPR001680 GO:0005515
Bisa10g0393 1073 SMART WD40_4 575 614 IPR001680 GO:0005515
Bisa10g0393 1073 SMART WD40_4 668 706 IPR001680 GO:0005515
Bisa10g0393 1073 SMART WD40_4 741 780 IPR001680 GO:0005515
Bisa10g0393 1073 SMART WD40_4 795 831 IPR001680 GO:0005515
Bisa10g0393 1073 ProSitePatterns Trp-Asp (WD) repeats signature. 693 707 IPR019775 -
Bisa10g0393 1073 MobiDBLite consensus disorder prediction 214 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0393 Bisa-ChrBisa10 8051844 8067262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0393 580 828 Miscellaneous Gene Families AT5G08390 21.673 1.90e-06 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa10g0393 10 8051844 8067262 Bisa06g0468 06 11429083 11429541 CCT
Bisa10g0393 10 8051844 8067262 Bisa10g0393 10 8051844 8067262 ECH