Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa10g0229 ATGCACGAAGACAGAGCCGTAATAGCGTGGCGGAAAATCCCTTCCCTTCACCACGCCTCCAATGACCGCGAACCACTTTGTAAGAAGAAGAACGCCAGGCTCACTCTCGCTCTCAGTGGCACTCCTTGTAAATTCGCGTGCGTTTCGGTGGCAGAAAGAAAACTGGATAAGGAGTTCCTGCCCAAGCCAGCTCAGCTCTTGAAGCATCCGCTAGCTGCAGTCGCATTCGTGCCCAAGGACGCCACGCTCTTCCTCGCAGGAGCCATCGCCGGCGCTGCCGCCAAGACTGTCACGGCTCCTCTAGACCGAATCAAAATTCTTATGCAGACTCATGGGGTCCGAGTTGGGCAAGAAAGTGCTAAGAAGGCAATTAATTTGATTGAGGCCATAACAGCAATAGGGAAAGAAGAAGGCATTAAAGGTTACTGGAAGGGGAACCTCCCCCAGGTTATTCGGATTATACCTTATAGTGCTGTCCAGCTTTTTGCATATGAAATTTATAAGAAAATGTTCAGGGGAAAGGATGGTGAGCTCTCTGTTGTTGGAAGACTGGCAGCAGGTGCTTTTGCTGGCATGACATCAACTTTTGTAACTTATCCATTGGATGTCTTGAGATTACGCTTAGCAGTCGAACCGGGTTATCGAACGATGTCAGAGGTTGCCTTGAGCATGCTAAGAGAGGAAGGTTTGCTATCATTCTATTACGGCCTAGGGCCTTCTCTTATTGGAATAGCTCCTTACATTGCAGTCAACTTTTGTGTTTTTGACTTATTAAAGAAGTCTTTGCCGGAGAAGTATCAAAAGAGAACTGAAACATCTCTACTAACAGCTGTGCTTTCTGCATCTCTTGCCACGCTTACATGCTATCCTCTGGACACTGTGCGAAGGCAGATGCAATTGAAGGGTGCACCTTATAAGACAGTTTTAGATGCCCTTTCAGGCATTGTGGCACGGGATGGAGTTATTGGCTTGTATCGGGGTTTTATACCCAATGCTTTGAAAACCCTACCAAACAGCAGCATCAGGCTTACCACATATGATTCTGTTAAACGCGTAATTGCAGCTAGTGACAAAGAGTTTCAGACAATTATAGAGGAAAATCGTGAGAAACAACACGACACCAATAAACAGGGAAGTTGA 1140 0.4658 MHEDRAVIAWRKIPSLHHASNDREPLCKKKNARLTLALSGTPCKFACVSVAERKLDKEFLPKPAQLLKHPLAAVAFVPKDATLFLAGAIAGAAAKTVTAPLDRIKILMQTHGVRVGQESAKKAINLIEAITAIGKEEGIKGYWKGNLPQVIRIIPYSAVQLFAYEIYKKMFRGKDGELSVVGRLAAGAFAGMTSTFVTYPLDVLRLRLAVEPGYRTMSEVALSMLREEGLLSFYYGLGPSLIGIAPYIAVNFCVFDLLKKSLPEKYQKRTETSLLTAVLSASLATLTCYPLDTVRRQMQLKGAPYKTVLDALSGIVARDGVIGLYRGFIPNALKTLPNSSIRLTTYDSVKRVIAASDKEFQTIIEENREKQHDTNKQGS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa10g0229 379 SUPERFAMILY Mitochondrial carrier 82 347 IPR023395 -
Bisa10g0229 379 PRINTS Mitochondrial carrier protein signature 234 252 IPR002067 GO:0055085
Bisa10g0229 379 PRINTS Mitochondrial carrier protein signature 96 110 IPR002067 GO:0055085
Bisa10g0229 379 PRINTS Mitochondrial carrier protein signature 277 299 IPR002067 GO:0055085
Bisa10g0229 379 PRINTS Mitochondrial carrier protein signature 145 165 IPR002067 GO:0055085
Bisa10g0229 379 PRINTS Mitochondrial carrier protein signature 83 96 IPR002067 GO:0055085
Bisa10g0229 379 PRINTS Mitochondrial carrier protein signature 193 211 IPR002067 GO:0055085
Bisa10g0229 379 Gene3D Mitochondrial carrier domain 80 360 IPR023395 -
Bisa10g0229 379 FunFam Envelope ADP,ATP carrier protein 80 358 - -
Bisa10g0229 379 Pfam Mitochondrial carrier protein 177 264 IPR018108 -
Bisa10g0229 379 Pfam Mitochondrial carrier protein 272 354 IPR018108 -
Bisa10g0229 379 Pfam Mitochondrial carrier protein 83 173 IPR018108 -
Bisa10g0229 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 268 352 IPR018108 -
Bisa10g0229 379 PANTHER SOLUTE CARRIER FAMILY 25 77 353 - -
Bisa10g0229 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 178 261 IPR018108 -
Bisa10g0229 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 78 170 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa10g0229 Bisa-ChrBisa10 4300491 4305172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa10g0229 1 372 Organic Solute Cotransporters AT3G51870 67.018 0.0 511
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa06g0224 06 5653494 5657704 Bisa10g0229 10 4300491 4305172 CCT
Bisa10g0229 10 4300491 4305172 Bisa10g0229 10 4300491 4305172 ECH