Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2154 ATGGCTAGTTCTGTTGAAACCGCTTCTCCCAAACAGGTTGTGTCAGAGACACCAATCTCCGAATCCAGAGATGGTGGTCGTACTGCCTCGGCATCGGCCTCGCCCTCGGCCCCTCCCGAGGTTCATATAATCCATATCCCCAGCCACTCCAGATGGTTTTCATGGAATGGCATACACGAATGCGAGGTTCGGCATCTCCCTGAGTTTTTCGACTCTGTTTCGCCCTCCAAGAACCCTAGGGTTTACAAGTACTACAGGAATTCCATTGTCAAGTATTTCAGGGATAATCCTACCAGAAAGATCACTTTCACCGATGTCAGGAAAACTCTTGTAGGGGATGTGGGTTCCATCCGTAGAGTCTTTGATTTCCTGGAGGCATGGAGCTTGATCAATTACCAATCATCCTCAGCGACGACCAAGCCCCTGAAGTGGGAAGACAAGGAGGCCAAGCCCGAAGCTGGACCTAATTCGAGCGAATCTTCAACGCCAGTACGAGAGACCACAAAGAGAGTCTGCAGTGGTTGCAAAGCTACCTGTACCATTGCTTGCTTCGCTTGTGATAAGTATGACTTGACTCTCTGTGCAAGATGTTATGTCCGTGGCAATTATCGAGTTGGTGTGAGCTCTTCAGATTTCAGGCGAGTGGAGATCAGTGAGGAGGCTAAGACAGAGTGGACTGATAAGGAAACTTTGCATCTTCTGGAAGCCATTACGCATTATGGTGATGACTGGAGGAAGGTTTCTCAGCATGTTGGTGGTCGGACTGAGAAGGAATGCGTTGCTCATTTTGTCAAGCTTTCTTTTGGGGAGGAATTTCTACATTATCAATGCTCAGGTGTGAATAATGACAAAGATAATCAATTAAAGGAACTTCTTGATGCTGAAAGTGGATTGGAAAGTACTGCTGCAGCAGAATCAAATAAAAGAATGCGTCTAACACCTCTTTCTGATGCAAGCAATCCTATAATGGCACAGGCTGCTTTCTTGTCTGCTTTGGTGGGGGTAGAGGTTGCACAGGCTGCTGCTCAAGCTGCATTGGCCACTCTGTCTGAGGTTTACAGATCAACTAGAATAAATTATCGGTCACTTCCAAGGAAAACATTACTGCAAGATACTGATATTGCGTCTAATGGGAACACTGCATCAGATACATTTGAATGGACTCGATTGCAGGCAAATGCACAGCTTGAGAAGGAAGAGTCAGATGTGGAAAAAGCGATTTCTGGGATTATAGAAGTTCAGATGAAGAATATCCGTGGCAAGCTTCTTCATTTTGAAGATCTAGACCTGCTGTTGGAGAAAGAATGCCAGCAGCTGGAGCAAATGAAGAATATGCTTTACGTTGATAAGCTTACTCTTCTATTTCGTAGACAATCAGCACCAGTAACTGGAGATAGAACAGAAGAGAATAAACAGACTGATAACAAATGA 1431 0.4528 MASSVETASPKQVVSETPISESRDGGRTASASASPSAPPEVHIIHIPSHSRWFSWNGIHECEVRHLPEFFDSVSPSKNPRVYKYYRNSIVKYFRDNPTRKITFTDVRKTLVGDVGSIRRVFDFLEAWSLINYQSSSATTKPLKWEDKEAKPEAGPNSSESSTPVRETTKRVCSGCKATCTIACFACDKYDLTLCARCYVRGNYRVGVSSSDFRRVEISEEAKTEWTDKETLHLLEAITHYGDDWRKVSQHVGGRTEKECVAHFVKLSFGEEFLHYQCSGVNNDKDNQLKELLDAESGLESTAAAESNKRMRLTPLSDASNPIMAQAAFLSALVGVEVAQAAAQAALATLSEVYRSTRINYRSLPRKTLLQDTDIASNGNTASDTFEWTRLQANAQLEKEESDVEKAISGIIEVQMKNIRGKLLHFEDLDLLLEKECQQLEQMKNMLYVDKLTLLFRRQSAPVTGDRTEENKQTDNK 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2154 476 ProSiteProfiles SANT domain profile. 220 271 IPR017884 -
Bisa09g2154 476 FunFam SWI/SNF complex subunit SMARCC2 isoform c 50 137 - -
Bisa09g2154 476 Pfam Myb-like DNA-binding domain 223 265 IPR001005 -
Bisa09g2154 476 CDD SANT 224 266 IPR001005 -
Bisa09g2154 476 ProSiteProfiles SWIRM domain profile. 44 141 IPR007526 GO:0005515
Bisa09g2154 476 MobiDBLite consensus disorder prediction 143 163 - -
Bisa09g2154 476 ProSiteProfiles Myb-like domain profile. 217 267 IPR001005 -
Bisa09g2154 476 SUPERFAMILY Homeodomain-like 222 267 IPR009057 -
Bisa09g2154 476 Gene3D - 220 269 - -
Bisa09g2154 476 PANTHER SWI/SNF COMPLEX-RELATED 26 450 - -
Bisa09g2154 476 SUPERFAMILY Homeodomain-like 40 142 IPR009057 -
Bisa09g2154 476 Gene3D - 50 136 IPR036388 -
Bisa09g2154 476 FunFam SWI/SNF complex subunit SMARCC2 isoform C 220 271 - -
Bisa09g2154 476 Pfam SWIRM-associated region 1 392 457 IPR032451 -
Bisa09g2154 476 Pfam SWIRM domain 47 132 IPR007526 GO:0005515
Bisa09g2154 476 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 222 259 IPR017930 -
Bisa09g2154 476 SMART sant 221 269 IPR001005 -
Bisa09g2154 476 MobiDBLite consensus disorder prediction 1 35 - -
Bisa09g2154 476 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2154 Bisa-ChrBisa09 34650792 34654934 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2154 183 263 EF-hand Containing Proteins AT3G07740 37.234 2.44e-07 51.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g2154 09 34650792 34654934 Bisa09g2154 09 34650792 34654934 ECH