Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2094 ATGGCCTTCATCAAGTCTAGGGTACGCTTCCATTTCTCTCTCACTCGCACTCCCATACTATATTCTTTTTCGTCGTCTTCTTCAGCTTTGGTACAAGCTCCTCTTCAAGAGACCACAGACGAAACTGCCCAAATCACTTACTTATCTCCTGAACAATCGCATATAGCCGACGAATTTCACGCTTTAATCAAGGACCATTACCGCAAGAACCCTAGCCCTAACCCTAACTCCCCTCTACCCACCCCCAATTTTACCATCCCCGATCTCTCCCTCGAATTTTCTCGAATCTCCGCCACCCATCCGCCTACCCCCTCCATCGTCCGGCGCGTGCTCGAGAAATGCGGTGGCGTCCGCCACGGCATCCCTTTCCTCCAATCCCTCGGGTTCTTCAATTGGGCCACCACGTGCGAGGGTTTTCCTACCTCTCCCGACCCCTACATTGAGATGGTTGACCTCGCTGGAAAGCTGAGGCACTTCGAATTAGCCTGGCATTTCATCGATTTGATGAAAGCCCGGGGTGTCCCAATATCCGTCGAGACATTCTCCGTTCTCGTCCGGCGCTACGTCAGAGCTGGATTGGCTGCTGAGGCAGTGCACACGTTTAATCGTATGGAAGATTATGGTTGTACACCTGACAAAATTGCATTCTCCATTGTGATAAGTATTCTGTGCAAGAAGAGAAGGGCAAGCGAAGCTCAGTCTTTTTTTGATAGTTTGAAGCATAGATTTGAGCCCGATGTTATAGTGTACACCAACTTAGTTCGTGGTTGGTGTCGAGCAGGTAATATTCCAGAGGCCGAGCGTGTATTCGGAGAAATGAAGATGGCTGGAATCAAGCCTAATGTTTATACTTACAGCATTGTGATTGACTCACTGTGTCGGTGCGGACAAATTACTCGTGCGCATGATGTTTTCTCAGAGATGATAGATGTGGGTTGCGATCCTAATGCCATTACTTTCAACAATCTGATGCGTGTTCATGTCAAAGCTGGAAGGACTGAGAAGGTCCTGCAAGTTTACAATCAGATGAAGAGACTTGGATGTCCTCCTGATACCATTACCTATAATTTCTTAATAGAGACGCATTGTAAAGATGATAATCTTGAAGAAGCTACCAAGGTTCTCAATTCAATGGTCAAGAAAGGGTGTGCTCCCAATGTGTCTACTTTCAATCTTATATATAAATGCATAGCTAAGTTACATGATATAAACAGTGCACATCGGTTGTATGCTAAAATGAAGGAGCTCAAGTGTCGGCCTAATACCTTGACATACAACGTATTAATGAGTATGTTTGCTCATGCGAAGTCTGCTGATATGGTTCTCAAGATGAAGAAGGAAATGGATGAGAATGAAGTTGAGCCTAATATCAATACTTACCGAGTTTTGATCTCAATGTATTGCGGAATGGGACATTGGAACAATGCCTACAAGTTACTGAGGGAGATGGTTGACGAAAAATGCCTAAAACCAAATCGATTGGTTTATGAGATGGTTCTGAGCGAACTGAGGAAGGCAGGACAGTTAAAGAAGCATGAGGAGTTGGTGGACAAGATGGTTGATAGGGGATTTCTTTCTCGCTCTATATAG 1590 0.4516 MAFIKSRVRFHFSLTRTPILYSFSSSSSALVQAPLQETTDETAQITYLSPEQSHIADEFHALIKDHYRKNPSPNPNSPLPTPNFTIPDLSLEFSRISATHPPTPSIVRRVLEKCGGVRHGIPFLQSLGFFNWATTCEGFPTSPDPYIEMVDLAGKLRHFELAWHFIDLMKARGVPISVETFSVLVRRYVRAGLAAEAVHTFNRMEDYGCTPDKIAFSIVISILCKKRRASEAQSFFDSLKHRFEPDVIVYTNLVRGWCRAGNIPEAERVFGEMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDTITYNFLIETHCKDDNLEEATKVLNSMVKKGCAPNVSTFNLIYKCIAKLHDINSAHRLYAKMKELKCRPNTLTYNVLMSMFAHAKSADMVLKMKKEMDENEVEPNINTYRVLISMYCGMGHWNNAYKLLREMVDEKCLKPNRLVYEMVLSELRKAGQLKKHEELVDKMVDRGFLSRSI 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2094 529 Pfam PPR repeat family 420 468 IPR002885 -
Bisa09g2094 529 Pfam PPR repeat family 315 364 IPR002885 -
Bisa09g2094 529 Pfam PPR repeat family 245 294 IPR002885 -
Bisa09g2094 529 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 246 280 IPR002885 -
Bisa09g2094 529 Gene3D Tetratricopeptide repeat domain 312 401 IPR011990 GO:0005515
Bisa09g2094 529 Gene3D Tetratricopeptide repeat domain 402 522 IPR011990 GO:0005515
Bisa09g2094 529 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 316 350 IPR002885 -
Bisa09g2094 529 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 386 420 IPR002885 -
Bisa09g2094 529 Pfam Pentatricopeptide repeat domain 169 223 IPR002885 -
Bisa09g2094 529 NCBIfam pentatricopeptide repeat 389 422 IPR002885 -
Bisa09g2094 529 NCBIfam pentatricopeptide repeat 318 352 IPR002885 -
Bisa09g2094 529 NCBIfam pentatricopeptide repeat 353 387 IPR002885 -
Bisa09g2094 529 NCBIfam pentatricopeptide repeat 424 457 IPR002885 -
Bisa09g2094 529 NCBIfam pentatricopeptide repeat 283 317 IPR002885 -
Bisa09g2094 529 NCBIfam pentatricopeptide repeat 248 282 IPR002885 -
Bisa09g2094 529 NCBIfam pentatricopeptide repeat 459 491 IPR002885 -
Bisa09g2094 529 NCBIfam pentatricopeptide repeat 180 212 IPR002885 -
Bisa09g2094 529 SUPERFAMILY TPR-like 176 413 IPR011990 GO:0005515
Bisa09g2094 529 Gene3D Tetratricopeptide repeat domain 240 311 IPR011990 GO:0005515
Bisa09g2094 529 Gene3D Tetratricopeptide repeat domain 123 239 IPR011990 GO:0005515
Bisa09g2094 529 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 456 490 IPR002885 -
Bisa09g2094 529 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 281 315 IPR002885 -
Bisa09g2094 529 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 351 385 IPR002885 -
Bisa09g2094 529 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 421 455 IPR002885 -
Bisa09g2094 529 PANTHER RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED 218 522 - -
Bisa09g2094 529 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 177 211 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2094 180 529 Glycosyltransferase AT1G05670 24.432 3.94e-32 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g2094 09 33551795 33553384 Bisa09g2094 09 33551795 33553384 ECH