Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2073 ATGCAACAAGGAGATTATAGTTCGTCTCATTATTATCAATTCCCTCATGCGCAAAACCCAATTCCCAACCCTAACCCTAATCATCCCGATTCACTGCCAAACCAGTACGCCTCCGCGCCTCCCTTCACCTCTGATTACGCGGCTTACGCCCCTAGTTATCCTCCATACCCTCAAAATCCCGATCCTTTAGCAGCTCCTCCCACTGCTCCTTCATACCCTCCCACCTCCAACCCTAATTTGCACTCTTTCAGTTCTCCTCCTCAGCCCTCCTCTTTTCCTCTGTTTGATTCACAGATTCCGTACCAACCACCGTCTCAGCAACAATGCCGATATCCGCCGTATGATCAGCCTCAGACATCTCCAAATTATGCCCCTTCTTCCTCCGCTGTTCCGCCAAACCCAAGTCCCTATTCTTCATACCCGTCCTCGTCCTCGTCCTCGTATTCGGCTTCGTACCCTCATCCTGGATCTTCTGTTCCTCCTACATACGAAAGTCCTTATGAGAATTCCGTGAAATTGGATTATGGTGGTGCTTATATCGATGACAAGTATGGAAGTTTTAATCGAAGCCGGCCCGATTTGGGGTCGGATTTGTCTGGAAAGCGACAGGATAGTGGGATTTTGAGGTATGATACTGGTCGTGATGAAATGTACGGAGATGATGTGTACGCCTATGAAGGGGGCAAATTCGAACCTTATGGAGCACGGGGTACGGCTCCGAAGTCATCTACTTGGTCCGCATTTGATGATTATGGAAGGGCAATTAGTTTTCCCTCTCCGAAAGAATCCTCTCTTGCAACTAAGGTTGTGAAAGCAGTGCCGAAGACTGATGCCCAAGAGGATGTGAAAAGCGGGGTGCAAAAATTTCGTGTCAAACTATTGGCAGAAAGTGCTGGTCAGGGCACTATGGATGTTCTCTTTCAGGTTGCTTTAGATGGAATTCGTATGCTGGATCCTAGTACCAGCCGGACGTTGAGAATTTATCCTCTTGAGAACATTACGAGATGTGAAAAATTCGATTCATCTACCTTTGCATTTTGGTCCAAGAGTACAGTTGACATTGAGCCTAGACGAATCAGATTGCAATCCAATAGTTACACAACCAACACAATTTTGGATACAGTGACTGCTGCAACAATACAGTTCAAGGAGATGGGTGGAAGTAGGAGGCCTACTGAATCATTGAAAACGATTGAACAACCTGCAGAAAAGAAGAAAGGCTTTACTGATTGGATGAATATGATTAAACCTGCCAATGAAGAAAAAGATCATTGGGTCCCAGATGAAGCAGTTTCAAAATGTACAGCATGTGGCACTGATTTTGGAGCTTTTGTTCGTAAGCATCACTGTCGAAACTGTGGTGATATTTTCTGCGACAAATGTACACATGGTAGAATTGCTCTAACTGCTGATGAGAATGCTCAGCCAGTACGAGTTTGTGACCGATGCATGGCAGAAGTGACCCAGAGGCTCAGTAATGCTAAAGAGGCAGCAAGCAAGCCTGTGTTGCCAAGTCACGAGGATCTTGCTAGGAAACTTCAGGAGGAGTTGGAGAGGAATCGGAAGACATCAGGCTCCAAGTCTGATGGGTCTGGAAGACGGATGAAAGAAGTTGAATGTCCTACGTGCACAGTGCATCTGCAGGTTCAAGTACCTAGCTCAGGTTCAGAGACCATAGAGTGTGGGGTATGCCAGCGCCCATTTCTTGTGAGTGCTCATTAA 1722 0.4646 MQQGDYSSSHYYQFPHAQNPIPNPNPNHPDSLPNQYASAPPFTSDYAAYAPSYPPYPQNPDPLAAPPTAPSYPPTSNPNLHSFSSPPQPSSFPLFDSQIPYQPPSQQQCRYPPYDQPQTSPNYAPSSSAVPPNPSPYSSYPSSSSSSYSASYPHPGSSVPPTYESPYENSVKLDYGGAYIDDKYGSFNRSRPDLGSDLSGKRQDSGILRYDTGRDEMYGDDVYAYEGGKFEPYGARGTAPKSSTWSAFDDYGRAISFPSPKESSLATKVVKAVPKTDAQEDVKSGVQKFRVKLLAESAGQGTMDVLFQVALDGIRMLDPSTSRTLRIYPLENITRCEKFDSSTFAFWSKSTVDIEPRRIRLQSNSYTTNTILDTVTAATIQFKEMGGSRRPTESLKTIEQPAEKKKGFTDWMNMIKPANEEKDHWVPDEAVSKCTACGTDFGAFVRKHHCRNCGDIFCDKCTHGRIALTADENAQPVRVCDRCMAEVTQRLSNAKEAASKPVLPSHEDLARKLQEELERNRKTSGSKSDGSGRRMKEVECPTCTVHLQVQVPSSGSETIECGVCQRPFLVSAH 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2073 573 MobiDBLite consensus disorder prediction 1 165 - -
Bisa09g2073 573 SUPERFAMILY FYVE/PHD zinc finger 423 494 IPR011011 -
Bisa09g2073 573 PANTHER PROTEIN FREE1 1 573 IPR045893 GO:0036258|GO:0043130
Bisa09g2073 573 Coils Coil 503 523 - -
Bisa09g2073 573 MobiDBLite consensus disorder prediction 53 74 - -
Bisa09g2073 573 SUPERFAMILY PH domain-like 289 350 - -
Bisa09g2073 573 Pfam FYVE zinc finger 424 488 IPR000306 GO:0046872
Bisa09g2073 573 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 428 488 IPR017455 -
Bisa09g2073 573 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 414 493 IPR013083 -
Bisa09g2073 573 SMART fyve_4 420 489 IPR000306 GO:0046872
Bisa09g2073 573 MobiDBLite consensus disorder prediction 75 126 - -
Bisa09g2073 573 FunFam Zinc finger, FYVE-type, endofin 415 493 - -
Bisa09g2073 573 MobiDBLite consensus disorder prediction 1 18 - -
Bisa09g2073 573 MobiDBLite consensus disorder prediction 139 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2073 Bisa-ChrBisa09 33156048 33162632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g2073 406 501 EF-hand Containing Proteins AT3G14270 31.304 2.84e-13 71.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g2073 09 33156048 33162632 Bisa09g2073 09 33156048 33162632 ECH