Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2025 ATGTCTGCAGTCGTAGCGGAGAAGAATGTTGAAGAAGAGAAGGAGGAGGTGAAAGGGGGAGAGCTCTTGTTCTGCGGTGGTACGTGTTGGGATATTATTGGTCGTCGCAAAGGTCCCGTCGAAGGCAACTTGGTCTCTCCAACTCGGCTCCGCCCTCTCGTTGGGATCGATATTCGGTTCGTTGCCTCTGGGTGTGCGTCTTGTCATTGCGTGGCATTGGATGTCGAAGGGCGTTGCTACACATGGGGACGCAACGAGAAAGGCCAACTGGGTCATGGAGATAGCATTCAGCGCGATAGACCGACCGTGGTGTCTGAGCTTTCAAAACACAAAATCATTAAAGCTGGAGCAGGGAGGAACCACACAGTGGTTGTTACGGAAGACGGACACTCCTTTGCATTTGGTTGGAATAAGCACGGACAGCTAGGCTCTGGTTCTGTAAAAAATGAATTTGAGAAATCTCCTGTTCGCTGTCTTGTGTCAGAAGTCAAATATACTACTTGTGGTGGCGACTTCACTGTGTGGTTATCTTCCATTGAAGGAGCTTCTATACTTACTGCAGGGCTTCCACAGTATGGGCAGCTTGGTCATGGAACAGATAATGAGTATAATTCCAAAGACAGCTCTGTGAGGTTGGTTTATGAAGCGCAACCACGTCCTCGGGCAATTGCTGCACTTGCTGGGGAAACAATTGTTAAAGTGGCATGTGGAACAAATCACACAGTGGCGGTGGATAAGAATGGCTTCGTTTACACGTGGGGTTTTGGTGGTTATGGAAGGCTTGGACATAGGGAGCAGAAGGATGAGTGGGTTCCACGACGTGTAGATGTTTTTCAGAACAGAAACGTTCTGCCTCCTGATGCTGTGATTTCAGCTGGCTCTGTTAACTCTGCATGCACTGCAGGTGGAGGGCAATTGTATATGTGGGGAAAAATAAAGAACACCGGTGATGACTGGATGTATCCTAAGCCCCAAATGGATTTAAGTGGCTGGAACATACGCTGCATGGATTCAGGCAATATGCACCATTTTGTTGGGGCAGATTCTTCATGCATTAGTTGGGGCCATGCTCAGCATGGAGAACTGGGATATGGACCTAATGGACAGAAGTCTTCAGCGGTACCTAAAAAGGTAGATATTCTTGAGGGCATGCATGTTATGGGTGTTGCTTGTGGTATGGGTCACTCCATGGTCATTGTTGATAGAACAAATGTTGCTGAACGACTTGACCAGCTTGATATATATGATGGCAAAGCTTTTGGGGAAGTGATTGAAGAACCTGTAAAGAAAACTACAGCACCCAAGCAGAATGCAAAAAAGGGTGCAAAAGGTGCTGACAAATCAAAGAGGAAGAAGTCAAAGGAATCCTCTGAATCGGAGGAGGAAGAGGACGGTCAAGAAAGTGATGATAGCGACGAGCAAGTAAATGGTGTGGCTAAGCGGAAAAGGAGAAGTGGTGGAAACAATTCTAGTAAAGCGAAAGCTAAAGCTAAAGGTTCCACTGCAGGGCGTAACCGCCCTCCAGCAAAGACGGGTAAGAGAGGAAGACCCCGCAAGTCATGA 1563 0.476 MSAVVAEKNVEEEKEEVKGGELLFCGGTCWDIIGRRKGPVEGNLVSPTRLRPLVGIDIRFVASGCASCHCVALDVEGRCYTWGRNEKGQLGHGDSIQRDRPTVVSELSKHKIIKAGAGRNHTVVVTEDGHSFAFGWNKHGQLGSGSVKNEFEKSPVRCLVSEVKYTTCGGDFTVWLSSIEGASILTAGLPQYGQLGHGTDNEYNSKDSSVRLVYEAQPRPRAIAALAGETIVKVACGTNHTVAVDKNGFVYTWGFGGYGRLGHREQKDEWVPRRVDVFQNRNVLPPDAVISAGSVNSACTAGGGQLYMWGKIKNTGDDWMYPKPQMDLSGWNIRCMDSGNMHHFVGADSSCISWGHAQHGELGYGPNGQKSSAVPKKVDILEGMHVMGVACGMGHSMVIVDRTNVAERLDQLDIYDGKAFGEVIEEPVKKTTAPKQNAKKGAKGADKSKRKKSKESSESEEEEDGQESDDSDEQVNGVAKRKRRSGGNNSSKAKAKAKGSTAGRNRPPAKTGKRGRPRKS 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2025 520 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 248 303 IPR000408 -
Bisa09g2025 520 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 77 128 IPR000408 -
Bisa09g2025 520 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 182 247 IPR000408 -
Bisa09g2025 520 Gene3D - 13 210 IPR009091 -
Bisa09g2025 520 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 349 402 IPR000408 -
Bisa09g2025 520 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 115 125 IPR000408 -
Bisa09g2025 520 MobiDBLite consensus disorder prediction 440 459 - -
Bisa09g2025 520 MobiDBLite consensus disorder prediction 431 520 - -
Bisa09g2025 520 Pfam Regulator of chromosome condensation (RCC1) repeat 247 285 IPR000408 -
Bisa09g2025 520 Pfam Regulator of chromosome condensation (RCC1) repeat 128 174 IPR000408 -
Bisa09g2025 520 Pfam Regulator of chromosome condensation (RCC1) repeat 353 399 IPR000408 -
Bisa09g2025 520 Pfam Regulator of chromosome condensation (RCC1) repeat 76 125 IPR000408 -
Bisa09g2025 520 Pfam Regulator of chromosome condensation (RCC1) repeat 185 244 IPR000408 -
Bisa09g2025 520 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 234 244 IPR000408 -
Bisa09g2025 520 PRINTS Chromosome condensation regulator RCC1 signature 112 125 IPR000408 -
Bisa09g2025 520 PRINTS Chromosome condensation regulator RCC1 signature 131 147 IPR000408 -
Bisa09g2025 520 PRINTS Chromosome condensation regulator RCC1 signature 78 94 IPR000408 -
Bisa09g2025 520 PRINTS Chromosome condensation regulator RCC1 signature 250 264 IPR000408 -
Bisa09g2025 520 PRINTS Chromosome condensation regulator RCC1 signature 234 250 IPR000408 -
Bisa09g2025 520 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 129 179 IPR000408 -
Bisa09g2025 520 SUPERFAMILY RCC1/BLIP-II 19 402 IPR009091 -
Bisa09g2025 520 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 389 399 IPR000408 -
Bisa09g2025 520 Gene3D - 211 407 IPR009091 -
Bisa09g2025 520 PANTHER PROTEIN RCC2 8 504 IPR028641 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2025 Bisa-ChrBisa09 32421570 32427880 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g2025 09 32421570 32427880 Bisa09g2025 09 32421570 32427880 ECH