Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g2005 ATGAGTATCACTTCCTTTTTTCTCACTTTCTTTCTGCTTTTATCCACACCTTTCTCCTCTTCCTCTTCTCCCAACACCTCTGAGCTCTTCGAAAGCTGGTGCAAGCAACATGGCAAAACCTACTCCTCCGAAGACGAGAAACTCTACAGGTTCAAAGTGTTCGAGGACAACTACGCCTTCGTCACCAAACACAATCAAATTGGGAATTCTAGTTATACACTCTCCCTCAATGCCTTCGCCGATCTCACCCACCATGAATTCAAGGCCTCTCGTTTAGGTTTATCCCCTGCCTTGCTTCGATTCGACCGTCGAACGCCTCCGCCGCCCGATGACCCCCTGCTCCTTAATGATCTTCCTTCTGAAATTGATTGGAGAGCGCAAGGGGCGGTTACTGAGGTCAAGGACCAAGGAAACTGCGGTGCTTGTTGGTCGTTTTCAGCTACAGGAGCTATTGAAGGTATAAATAAGATCGTAACAGGTTCTCTTGTTAGCCTCTCTGAACAAGAATTGGTAGATTGTGATAGAACCTACAATGCCGGGTGCGGAGGTGGACTCATGGATTATGCTTTTCAATTTGTCATTGATAACCATGGGATTGACACTGAGGAAGATTATTCATTCAAAGCCCGTGATGGGTCTTGCAATAAGGATAAGTTAAAAAGGCATGTTGTAACAATTGATGGCTATACTGATGTGCCCTCAAATGATGAGAAACAGCTACGAAAGGCTGTTGCAACCCAGCCTGTTAGTGTTGGCATAAGTGGGAGTGATAGAGCTTTTCAGTTATACCAAAAGGGTATTTTCACTGGCCCATGTTCAACTGCTTTGGATCATGCGGTGCTGATTGTAGGATATGGCTCAGAAAATGGAGAAGATTATTGGATTGTGAAGAACTCATGGGGACCTCATTGGGGAATGAATGGTTACATCCACATGCAGCGAAACAGCGGCAATGCGAAAGGGCTCTGTGGAATCAACATGTTAGCATCATATCCAACCAAGACCAGCCCTAATCCTCCTCCCCCATCACCCCCATCTCCAGTAAAATGCAATCTCTTTACTTATTGTTCACAAGGGGAAACCTGCTGCTGTGCAAGGCACTTTTTTGGAATATGCATTTCATGGAAATGTTGTGGCATAGAATCTGCCGTCTGCTGTAAGGACAATCGCCACTGTTGTCCCCAAGATTATCCTGTTTGTGATACAACATCAGGCCAATGTCTTAAGAGCACTGCAAATACGACGATGACAAGGGAAGGTGAGGTTGAAGACTCTTTCCATAAGTCAAAGGGTTGGCAATCTCAATGA 1308 0.4534 MSITSFFLTFFLLLSTPFSSSSSPNTSELFESWCKQHGKTYSSEDEKLYRFKVFEDNYAFVTKHNQIGNSSYTLSLNAFADLTHHEFKASRLGLSPALLRFDRRTPPPPDDPLLLNDLPSEIDWRAQGAVTEVKDQGNCGACWSFSATGAIEGINKIVTGSLVSLSEQELVDCDRTYNAGCGGGLMDYAFQFVIDNHGIDTEEDYSFKARDGSCNKDKLKRHVVTIDGYTDVPSNDEKQLRKAVATQPVSVGISGSDRAFQLYQKGIFTGPCSTALDHAVLIVGYGSENGEDYWIVKNSWGPHWGMNGYIHMQRNSGNAKGLCGINMLASYPTKTSPNPPPPSPPSPVKCNLFTYCSQGETCCCARHFFGICISWKCCGIESAVCCKDNRHCCPQDYPVCDTTSGQCLKSTANTTMTREGEVEDSFHKSKGWQSQ 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g2005 435 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 136 147 IPR000169 -
Bisa09g2005 435 SUPERFAMILY Cysteine proteinases 25 333 IPR038765 -
Bisa09g2005 435 CDD Peptidase_C1A 121 332 IPR039417 -
Bisa09g2005 435 SMART GRAN_2 350 407 IPR000118 -
Bisa09g2005 435 SMART pept_c1 118 333 IPR000668 GO:0006508|GO:0008234
Bisa09g2005 435 FunFam Cysteine protease 1 347 410 - -
Bisa09g2005 435 FunFam cysteine protease XCP2 9 335 - -
Bisa09g2005 435 PRINTS Papain cysteine protease (C1) family signature 293 299 IPR000668 GO:0006508|GO:0008234
Bisa09g2005 435 PRINTS Papain cysteine protease (C1) family signature 278 288 IPR000668 GO:0006508|GO:0008234
Bisa09g2005 435 PRINTS Papain cysteine protease (C1) family signature 136 151 IPR000668 GO:0006508|GO:0008234
Bisa09g2005 435 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 25 331 IPR013128 GO:0008234
Bisa09g2005 435 Pfam Papain family cysteine protease 118 332 IPR000668 GO:0006508|GO:0008234
Bisa09g2005 435 Pfam Cathepsin propeptide inhibitor domain (I29) 30 87 IPR013201 -
Bisa09g2005 435 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 293 312 IPR025661 -
Bisa09g2005 435 SUPERFAMILY Granulin repeat 347 381 - -
Bisa09g2005 435 Gene3D Granulin 347 419 IPR037277 -
Bisa09g2005 435 Gene3D Cysteine proteinases 16 335 - -
Bisa09g2005 435 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 276 286 IPR025660 -
Bisa09g2005 435 Pfam Granulin 361 408 IPR000118 -
Bisa09g2005 435 SMART Inhibitor_I29_2 30 87 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g2005 Bisa-ChrBisa09 31780068 31783239 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g2005 09 31780068 31783239 Bisa09g2005 09 31780068 31783239 ECH