Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1884 ATGCAACCGATGGAGATGCTAGGCAGCTACATCAGTCGGGGCGTCTACACTGTTTCCGGCCCCTTTCATCCTTTTGGTGGCGCTGTGGATATTGTTGTGGTTGAGCAACAAGATGGGAGCTTCAAATCGTCGCCTTGGTACGTTCGATTTGGGAAATTTCAAGGGGTTCTAAAGGCAAAGGAAAAGGTGGTCAGCATTAGCGTCAATGGAGTGGATGCTGATTTTCATATGTATTTGGATCATAAAGGAGAAGCATTCTTCCTCAGGGAAGTGGATGCAGAAGATGGAGATTCTGTAATGTATCCATCATCTTCTAGCGATGAGACAGATAACCGACCCCAGGGTATTAAGCGTCCTTTGAAGTCCGAAAGTTGCAATTTTGATTCAGAAAAGTCAAATTCAGTCGCTCAGATTGATATAAGCAATGACAAACTTTTGTCCAGGACGAATTCTCGCCGGTCACAGCTACTTGGTTTTATATTTGGTCGAAGGTCGATGAAGGGCAATGATTGTATTCAGGGGAAAGTTGATGATCATGATCTTAGCAGGGTGGATTCATTGGAGCGTGCTGAGATTGCAGCTAACCTATTGGAAGTAAAGTGGTCTACCAATCTTGGCAGTGATAGACCACCTAGCAAAAACAGTACAAAAATTAAGGAGAGCTCATATCGCAGAGATAACATGGAGAATGTTTTGGACCGATGTAAATTAAATGATGAAGCTTGTTTGTGCTCTAAGCAAGAAGGCTTCAGTTGTTCAAAGCCTGAATTTGTAGGTCTTGGTGAGGAAGAGAATAAATTCCTATCATGTTTAAGCGCCCCAGACAAAGCTGTTGAAAATTTTGTAGTAGGTGAAAGCTTTACAGAAGGAAAAACCAATATGATAACAGAAATATCAACAGTAGTTGATGCTGCTGAGGACACTGAACCCAACACAAATGTGAAGGAAGTTGTATATGGTAGCACCAGGTCTGATTTACAAGTTGCAAGTGTAGAGCTTGGAACACACATTGAAGAGCAATTGAATGGAGAAGAGGTTTCTGGAGGTACCACTGTTGATATGCCGGTTTATGGAATTTCTGAGGGGGAATTTTTGGCAAATGGAGTTCAGTCTCTTGTTTATTGCAAAAAATCAGAGAGTTCGATGGTGGGAATGGATTGTTCAAGCGAACAAACTCATGAGTTGCTGTACCTTGCTAGTGGAGGAAGTCAACAAGTCCATGTACCTGAAATGTTACATGGAACAACTGTACTGCTGCCTGAGGTTACACAAACTGAGGATGACGCTGAAAATGTTGGTCTTGGGATTCCAGAAGTGGATGTTTCTGAGTTTCATTCTCAGCAAACAGATTGTTTTCATCTCAGTGTTAGTAATTATGGTACGGTGGACGCTAAAGACCTACCAACGTTGCCAAATCCTCAAACTGTCAATTTGGATTCAGGACTTTGTTCACTTAAAAAGGTTCAGTCAATCTGTGTTGCAACAACTGATGAGATTAATAATAAGGAAAATGATGTCCCAAGCATGTTATCATATCCTATGACTTCTATTGGTGATGGTGTCCTTAGCAATGCAACAAGTATAACATCGCCAACCATTTCAGAGGAAGAATGCTACCTTTTTGGTGATTTTGATGTATGCCAAATCACTGATCAGCGTGAGGGGTCAATCTCCCTTGATCTTGTAGATAAAGAAGATCATTTTTCTTCTGTGGACAGCATTGAAAAAGTGAACCAGTTAGTTGATCCAAGTCACAATTCACATTCATCTCCAGAAAGCTCTACCACTGAAAATCAATCTCCAGAAAGCTCCACCACTGAAAATCAAAGGGATGACCTTCATAAGTTAAGAGAAACACACAGTCCCATAATTGTCCCCAGAAATAAGGTTGTTATGAAGGAAATTGAACTGCAGACAATTTCCTTGCCCAATATTTCTTCTCATAGTAACAGTCTTAGTGAAGATGTTCATTATCCTTTGAGTCAATCACTTGACTCAAAGTCCAAATCATTGAAGCCGAGATTTCCTGACAAAGATTGCTCGAAGCATCTAAAATCAGATGGAGACAAAGAAAACCAGTTATTACATGAAGAGCCAGGTGACAATGATAACCATAATTCAGGGGAATTCAAGGGTGCTCTTCTGAATCCTCCTATTGCCGCTCCTATTGTTCTAGGCATGGTATCTTTTGGAAGTCAATATATATTTGAAACAAAAGGCATGATACCTATTGATCAAACTGAGAAAAATAATCCAGGAAACCCATCAAGACTCAACCCTTCTCCTGGTGGAAACTGGGGACTTTGGCCTTTCTCCTTCAGGGGATCAAGATCTAGGAAGGCTATGCTGCCTGCTCCAAGTGATGCCAAAAGTACAACTTCTGGTACTGCTTCAGAGAGTGCAAGAAGCACTGATGCTGCCAAAAATGAGCAAAAGCCCAATCAGACAAAAAAGAAGGTTAGAGTGAAGATTCCAACATCTGAACAGCTGGCATCCTTAAATCTTAAGGAAGGGAGGAACACAGTAACATTCACTTTCTCTACTGCTATGCTGAGGAAGCAGCAGGTTGATGCTCAGATATATTTGTGGAAATGGAATACTCGTATAGTAATCTCAGATGTGGATGGGACAATTACAAGATCAGATGTACTAGGACAGTTCATGCCTATGGTTGGGGTAGACTGGTCACAGACAGGGGTTGCACATTTATTCTCAGCTATCAAGGAAAATGGTTATCACCTGCTTTTTCTTAGTGCTCGTTCAATTTCTCAGGCCTATCACACCAGACAATTCCTATTGAACCTCAAGCAGAATGGGAAAGTTTTACCAGATGGTCCTGTTCTTATTTCCCCTGATGGACTTTTTCCCTCCCTATATCGAGAAGTTATCAGGAGGGCTCCTCATGAATTCAAAATTGCATGCTTAGAGGACATCAGGGCACTTTTTCCTTCTGATTGCAATCCATTCTACGCTGGATTTGGAAACAGGGATACTGATGAAATCAGCTACCATAAGATTGGAATACCAAAGGGAAAAATCTTCATTATTAATCCAAAGGGAGAGGTTGCTGTAAACCGTTGTCTTGATACAAAATCATACACTTCTATTCACGCTCTCGTAAATGGAATGTTCCCCCTAACGAATTCATCTGAGCAGGAGGACTTTAACTCAATTATTTGGCCATTTCCAGTGACAACAGAGCCTCATTCTCTTGTTAACACAAACATGTATGGGCACTCAGAAATTGGTGGACAGAAGATTTATGAAGGAGCAGCACCTTAA 3282 0.4116 MQPMEMLGSYISRGVYTVSGPFHPFGGAVDIVVVEQQDGSFKSSPWYVRFGKFQGVLKAKEKVVSISVNGVDADFHMYLDHKGEAFFLREVDAEDGDSVMYPSSSSDETDNRPQGIKRPLKSESCNFDSEKSNSVAQIDISNDKLLSRTNSRRSQLLGFIFGRRSMKGNDCIQGKVDDHDLSRVDSLERAEIAANLLEVKWSTNLGSDRPPSKNSTKIKESSYRRDNMENVLDRCKLNDEACLCSKQEGFSCSKPEFVGLGEEENKFLSCLSAPDKAVENFVVGESFTEGKTNMITEISTVVDAAEDTEPNTNVKEVVYGSTRSDLQVASVELGTHIEEQLNGEEVSGGTTVDMPVYGISEGEFLANGVQSLVYCKKSESSMVGMDCSSEQTHELLYLASGGSQQVHVPEMLHGTTVLLPEVTQTEDDAENVGLGIPEVDVSEFHSQQTDCFHLSVSNYGTVDAKDLPTLPNPQTVNLDSGLCSLKKVQSICVATTDEINNKENDVPSMLSYPMTSIGDGVLSNATSITSPTISEEECYLFGDFDVCQITDQREGSISLDLVDKEDHFSSVDSIEKVNQLVDPSHNSHSSPESSTTENQSPESSTTENQRDDLHKLRETHSPIIVPRNKVVMKEIELQTISLPNISSHSNSLSEDVHYPLSQSLDSKSKSLKPRFPDKDCSKHLKSDGDKENQLLHEEPGDNDNHNSGEFKGALLNPPIAAPIVLGMVSFGSQYIFETKGMIPIDQTEKNNPGNPSRLNPSPGGNWGLWPFSFRGSRSRKAMLPAPSDAKSTTSGTASESARSTDAAKNEQKPNQTKKKVRVKIPTSEQLASLNLKEGRNTVTFTFSTAMLRKQQVDAQIYLWKWNTRIVISDVDGTITRSDVLGQFMPMVGVDWSQTGVAHLFSAIKENGYHLLFLSARSISQAYHTRQFLLNLKQNGKVLPDGPVLISPDGLFPSLYREVIRRAPHEFKIACLEDIRALFPSDCNPFYAGFGNRDTDEISYHKIGIPKGKIFIINPKGEVAVNRCLDTKSYTSIHALVNGMFPLTNSSEQEDFNSIIWPFPVTTEPHSLVNTNMYGHSEIGGQKIYEGAAP 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1884 1093 Pfam LNS2 (Lipin/Ned1/Smp2) 825 1045 IPR013209 -
Bisa09g1884 1093 MobiDBLite consensus disorder prediction 663 710 - -
Bisa09g1884 1093 MobiDBLite consensus disorder prediction 745 761 - -
Bisa09g1884 1093 MobiDBLite consensus disorder prediction 203 223 - -
Bisa09g1884 1093 SMART lns2 869 1025 IPR031315 -
Bisa09g1884 1093 MobiDBLite consensus disorder prediction 607 621 - -
Bisa09g1884 1093 MobiDBLite consensus disorder prediction 581 606 - -
Bisa09g1884 1093 MobiDBLite consensus disorder prediction 779 823 - -
Bisa09g1884 1093 SUPERFAMILY HAD-like 861 1011 IPR036412 -
Bisa09g1884 1093 MobiDBLite consensus disorder prediction 745 765 - -
Bisa09g1884 1093 MobiDBLite consensus disorder prediction 581 621 - -
Bisa09g1884 1093 Pfam lipin, N-terminal conserved region 4 97 IPR007651 -
Bisa09g1884 1093 MobiDBLite consensus disorder prediction 670 705 - -
Bisa09g1884 1093 MobiDBLite consensus disorder prediction 787 810 - -
Bisa09g1884 1093 PANTHER LIPIN 1 1062 IPR026058 -
Bisa09g1884 1093 MobiDBLite consensus disorder prediction 98 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1884 Bisa-ChrBisa09 29589570 29597232 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0281 05 4502811 4509731 Bisa09g1884 09 29589570 29597232 CCT
Bisa09g1884 09 29589570 29597232 Bisa09g1884 09 29589570 29597232 ECH