Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1852 ATGACATCCAGTGTTCTTGTTGTGCAAGAAAAGAATCCATCTTCACTGCACCAGCCTCCTCCACTCTGTTGTGCCTCTTTCTCCTTCTCAAAAGTTTCTCACGGCAAAATGGGTTCGTCTAGATCGTCTCGCGCCATGATTGCGTTTCTGTTCGTGGTCTTCGCCGTGTCTTCGGCCTTGGACATGTCCATCATCTCCTACGACCAAACCCACGCTGACAAGTCCACGTGGAGGACCGACGACGAGATCATGGCGATCTACGAGCAGTGGCTTCAGAAGCATGGCAAGGCTTACAATGCTCTGGGCGAGAAGGAGAGGAGGTTCGAGATTTTCAAGGACAATCTCAGGTTCATCGATGAGCACAACGCTGAGAACCGGACCTACAAGGTCGGGTTGAACCGATTCGCCGATCTCACCAACGAAGAGTACCGGGCCAAGTACCTGGGAACCAGGATCGATCCCAAGAGGAGAATTGCTAAGACCCGGAGTAACCGTTACGCTCCGCTAGTCGGCGACAAATTGCCGGAATCTGTTGATTGGAGGAAGGAAGGTGCGGTTGTCGAAGTCAAAGACCAGGGAAGTTGCGGGAGTTGCTGGGCATTCTCAACCGTGGCCGCTGTTGAAGGAATAAATAAGTTAGTGACTGGCGATCTAATTTCATTATCTGAGCAAGAGTTGGTGGACTGTGATAAAACATACAACGAAGGGTGCAATGGCGGACTAATGGACTACGCCTTTGAGTTCATCATCAACAATGGTGGCATTGACACCGAAGAGGATTACCCCTACCAGGCTGTTGATGGCCAATGCGACCAATACAGGAAAAATGCGAAAGTTGTAACTATTGACGCCTACGAAGATGTTCCTGCCAATGATGAGAAAGCATTGAAAAAGGCTGTTGCGAATCAGCCCGTGAGCATCGCCATTGAAGCAGGTGGCAGGGAATTTCAGTTATATGTATCTGGTGTATTTACGGGAAGATGTGGGACAGCACTAGATCATGGTGTTACAGCTGTTGGATATGGTACAGAAAATGGAGTAGATTATTGGATTGTGAAGAATTCATGGGGCAACAGCTGGGGAGAAAACGGGTATATCAGGATGGAGCGTAATCTGGGCACAACCAATACGGGCAAGTGTGGAATTGCAGTGGAGGCCTCCTATCCTATCAAGAAAGGCCAAAATCCCCCAAACCCCGGACCATCTCCCCCTTCACCTGTGAAGCCACCCACTGTCTGTGATAGTTACTACAACTGTCCCGAGAGCACTACTTGCTGCTGCGTATACGAGTATGGAAAGTATTGCTTCGCCTGGGGATGCTGTCCTCTTGAGGCTGCCACCTGCTGTGAAGACCACTACAGTTGCTGCCCGCACGACTATCCTGTCTGTAACGTTGATGCAGGGACATGCCAATTGAGCAAGGACAACCCATTTGGAGTGAAGGCAATGAAGCGAACTCCAGCTAAGCCCTACTGGGCATTTGGAGATAAGAACAAGAGAAGCAGTGCCTGA 1512 0.4993 MTSSVLVVQEKNPSSLHQPPPLCCASFSFSKVSHGKMGSSRSSRAMIAFLFVVFAVSSALDMSIISYDQTHADKSTWRTDDEIMAIYEQWLQKHGKAYNALGEKERRFEIFKDNLRFIDEHNAENRTYKVGLNRFADLTNEEYRAKYLGTRIDPKRRIAKTRSNRYAPLVGDKLPESVDWRKEGAVVEVKDQGSCGSCWAFSTVAAVEGINKLVTGDLISLSEQELVDCDKTYNEGCNGGLMDYAFEFIINNGGIDTEEDYPYQAVDGQCDQYRKNAKVVTIDAYEDVPANDEKALKKAVANQPVSIAIEAGGREFQLYVSGVFTGRCGTALDHGVTAVGYGTENGVDYWIVKNSWGNSWGENGYIRMERNLGTTNTGKCGIAVEASYPIKKGQNPPNPGPSPPSPVKPPTVCDSYYNCPESTTCCCVYEYGKYCFAWGCCPLEAATCCEDHYSCCPHDYPVCNVDAGTCQLSKDNPFGVKAMKRTPAKPYWAFGDKNKRSSA 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1852 503 SUPERFAMILY Cysteine proteinases 79 390 IPR038765 -
Bisa09g1852 503 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 192 203 IPR000169 -
Bisa09g1852 503 SMART Inhibitor_I29_2 87 143 IPR013201 -
Bisa09g1852 503 SMART pept_c1 174 390 IPR000668 GO:0006508|GO:0008234
Bisa09g1852 503 Gene3D Granulin 410 473 IPR037277 -
Bisa09g1852 503 FunFam Cysteine protease 1 410 473 - -
Bisa09g1852 503 CDD Peptidase_C1A 175 389 IPR039417 -
Bisa09g1852 503 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 79 384 IPR013128 GO:0008234
Bisa09g1852 503 Pfam Papain family cysteine protease 174 390 IPR000668 GO:0006508|GO:0008234
Bisa09g1852 503 SUPERFAMILY Granulin repeat 410 444 - -
Bisa09g1852 503 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 349 368 IPR025661 -
Bisa09g1852 503 Gene3D Cysteine proteinases 66 392 - -
Bisa09g1852 503 PRINTS Papain cysteine protease (C1) family signature 349 355 IPR000668 GO:0006508|GO:0008234
Bisa09g1852 503 PRINTS Papain cysteine protease (C1) family signature 192 207 IPR000668 GO:0006508|GO:0008234
Bisa09g1852 503 PRINTS Papain cysteine protease (C1) family signature 334 344 IPR000668 GO:0006508|GO:0008234
Bisa09g1852 503 SMART GRAN_2 413 470 IPR000118 -
Bisa09g1852 503 Pfam Granulin 424 471 IPR000118 -
Bisa09g1852 503 Pfam Cathepsin propeptide inhibitor domain (I29) 87 143 IPR013201 -
Bisa09g1852 503 FunFam Cysteine protease 1 63 392 - -
Bisa09g1852 503 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 332 342 IPR025660 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1852 Bisa-ChrBisa09 28917447 28921441 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0209 05 3169786 3173551 Bisa09g1852 09 28917447 28921441 CCT
Bisa09g1852 09 28917447 28921441 Bisa09g1852 09 28917447 28921441 ECH