Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1718 ATGGTTCCGGTTTTATCATATATCTATAGAGATATTTTTCTTTTGATGCTTCCTATATCACCGGCATCGTCAGACGCGAGTCAAAACAGAGGCCCAAGATTTAGTAATCAAAGTAGTGAATACAAAGCATTGTATAAACAATCCACGTTCCTTCAAGTTTGGGATAGGCAAAAGGAGAGCTCTGCAATGGTCACCGTGCCCGCGCTCTCAAATTCGTATTTCTTTCCTACTAAACCTCTTCAAGAAACTGCTTTCTTTAATGCCAATGTCATCTTTATTGTACCATCTTCTTCTGTTTCTTCCTGGCGTCGGCTACGACAGCATTGTGCCAGTCGCACACCCGTTGTTGCGTCTGTGAAGGAGAATATAGGTCGTCTTAAAAAGACTATCAACGATTTCACTAGCATGAATTACTGGGTTGTTCGTGACTACTATCGTCTGGTGGACTCCGTCAATGCCTTCGAGCCACATATACAAAAATTGTCTGATGAGCAGTTGACCGCGAAAACTCAGGAGTTTCGCCTCCGGCTCAGCCGAGGTGATACGCTTGCTGATATTCAAGCTGAGGCATTTGCTGTTGTTCGTGAAGCTGCAAGAAGAAAACTTGGAATGCGCCATTTTGATGTCCAGATTATTGGTGGAGCTGTGCTTCATGATGGGTCCATCGCAGAAATGAAAACGGGGGAGGGAAAAACATTAGTTTCCACCTTGGCGGCATATCTTAATGCCCTGACTGGTGAGGGTGTTCATGTGGTAACTGTAAACGACTATTTAGCTCAACGTGATGCTGAATGGATGGGTCGTGTTCATCGTTTCTTAGGTCTTTCTGTCGGTCTTGTTCAGAGGGGGATGACTGCTGAAGAGCGGAGATCCAATTATAGATGTGATATAACATATACCAACAATTCGGAACTTGGCTTTGACTACCTACGAGATAATCTTGCTGGAAATAGTGGACAACTTGTGATGAGATGGCCAAAACCATTTCATTTTGCAATTGTTGATGAAGTGGATTCTGTTCTGATAGATGAAGGAAGAAATCCTTTGTTAATCAGTGGTGAGGCTAGTAAAGATGCTGCACGATACCCTGTCGCAGCAAAAGTTGCTGAATTGCTTATACGGGGCATTCATTATAATGTAGAACTTAAAGATAATTCAGTTGAGTTGACTGAGGAGGGAATTGCACTTGCTGAGATGGCTCTTGAAACAAATGACCTTTGGGATGAAAATGACCCTTGGGCTAGATTTGTGATGAATGCTTTGAAAGCTAAAGAATTCTATCGCCGGGATGTGCAATACATAGTCAGAGATGGGAAGGCTTTAATTATCAATGAGCTGACAGGAAGAGTTGAAGAGAAACGGAGATGGTCTGAGGGGATTCACCAGGCTGTGGAGGCAAAGGAAGGTTTAAAGATTCAGGCAGATTCAGTCGTTGTAGCACAGATCACATACCAGTCTTTATTTAAACTCTATCCAAAGCTGTCAGGAATGACTGGAACTGCAAAAACAGAAGAGAAAGAATTCTTAAAAATGTTCCAGATGCCAGTCATTGAAGTGCCCACAAATCTCCCAAATATTCGGAAAGATTTGCCTATTCAAGCTTTTGCTACTGCTCGTGGGAAATGGGAGCAAGTTCGTCGTGAAGTTGACTATATGTTTAGACAAGGCCGTCCTGTCTTAGTTGGGACAACTAGTGTAGAAAACTCCGAACTCTTGTCTGGTCTGCTTAAAAAATGGAATATTCCCCACAATGTTCTGAATGCTCGACCCAAGTATGCTGCCAGAGAAGCTCAGGTTGTTGCACAGGCAGGGCGTAAAAATGCCATTACAATCTCGACAAATATGGCAGGCAGGGGCACAGATATAATCCTTGGTGGAAATCCAAAAATGCTCGCCAGAGAAATTATAGAGGACAGCTTACTTTCGTTTTTGACACGAGAGGCTTCTAATATTGAACTTGCTGGTGAGGCAATTTCACAGAAGGTGCTTCCAAAGATAAAGGTTGGATCATCGTCATTGGCATTGCTTGCTAAGACAGCATTAATGGCTAAATATGTGTCCAAAAGCGAGGGTAAAAGCTGGACATATCAGAAGGCTAAATCTTTCATCTCAGAGGCTATTGAAATGAGTCAGTCATGTAATTTGAATGAATTGGAGAAGCTTGCCAAGGAAGAATCTGAGATGTACCCTCTTGGTCCAACGGTAGCGCTTGCTTATTTGTCAGTTCTGAAGGATTGTGAAGTGCACTGTTTGCATGAAGGGTCTGAGGTGAAAAGACTTGGGGGCCTTCATGTGATCGGTACATCCTTGCATGAGTCACGAAGAATCGATAATCAGCTTCGTGGCAGAGCAGGAAGGCAGGGGGATCCTGGATCAACACGATTTATGGTCAGCTTGCAGGATGAAATGTTTCAGAAGTTCAATTTTGATACTGAATGGGCCGTGAGACTTATTTCAAAGATTACAAATGATGAAGATATGCCAATTGAGGGTGATGCCATTGTGAAGCAGCTCTTGGCACTGCAAATTAATGCAGAAAAGTACTTCTTCAACATAAGAAAGAGCCTAGTAGAATTTGATGAAGTATTAGAGGTACAACGAAAGCATGTTTATGACCTTAGGCAGTTAATCCTTACAGGAGATGATGAAAGTTGTTCCCAACACATATTCCAGTACATGCAAGCTGTGGTGGATGAGATTGTTTTCGGCAACGTTGATCCACAAAAGAATCCGAGTAGCTGGGATTTGAGTAAGCTAATTAAAGAGTTTGTGACAATTGGTGGAAAGCTGTTGCATGGGATAACTGAAGACGCTTTGCTGAAATCACTTGGGCAATTGCATGATGTGGATTCCATTGATATTGTCAACTTTTCCCTTCCAAATTTGCCAGCACCTCCAAATGCTTTCAGAGGAATTCGCAGGAAGAGCTCTTCATTAAGACGTTGGCTTACTATTTGCTCTGATGATTCAATTGAGGATGGGAATTATCAGACAATTACTAATCTTCTTCGCAAGTACCTTGGAGATTTTCTGATTGCTTCCTATCTAAATGTTGTTGAAGAGTCTGGTTATGACGAGAGACATGTAAAGGAAGTTGAGAGAGCAGTTCTTGTGAAAACACTAGATTGTTTCTGGAGAGATCATCTTGTAAACATGAATAGACTAAATTCAGCGGTAAATGTAAGGAGTTTTGGCCACAGAAATCCTCTTGAAGAGTACAAAATTGATGGTTGTCGATTTTTCATCTCAATGCTTAGTGCAACTCGAAGGCTAACAGTGGAGTCACTGCTGCAGTATTGGGCATCTCCTATGGAGTCTCAAGAACTATTTGAATTATAA 3339 0.4205 MVPVLSYIYRDIFLLMLPISPASSDASQNRGPRFSNQSSEYKALYKQSTFLQVWDRQKESSAMVTVPALSNSYFFPTKPLQETAFFNANVIFIVPSSSVSSWRRLRQHCASRTPVVASVKENIGRLKKTINDFTSMNYWVVRDYYRLVDSVNAFEPHIQKLSDEQLTAKTQEFRLRLSRGDTLADIQAEAFAVVREAARRKLGMRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLVQRGMTAEERRSNYRCDITYTNNSELGFDYLRDNLAGNSGQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDAARYPVAAKVAELLIRGIHYNVELKDNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRDGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRKDLPIQAFATARGKWEQVRREVDYMFRQGRPVLVGTTSVENSELLSGLLKKWNIPHNVLNARPKYAAREAQVVAQAGRKNAITISTNMAGRGTDIILGGNPKMLAREIIEDSLLSFLTREASNIELAGEAISQKVLPKIKVGSSSLALLAKTALMAKYVSKSEGKSWTYQKAKSFISEAIEMSQSCNLNELEKLAKEESEMYPLGPTVALAYLSVLKDCEVHCLHEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFNFDTEWAVRLISKITNDEDMPIEGDAIVKQLLALQINAEKYFFNIRKSLVEFDEVLEVQRKHVYDLRQLILTGDDESCSQHIFQYMQAVVDEIVFGNVDPQKNPSSWDLSKLIKEFVTIGGKLLHGITEDALLKSLGQLHDVDSIDIVNFSLPNLPAPPNAFRGIRRKSSSLRRWLTICSDDSIEDGNYQTITNLLRKYLGDFLIASYLNVVEESGYDERHVKEVERAVLVKTLDCFWRDHLVNMNRLNSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVESLLQYWASPMESQELFEL 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1718 1112 Hamap Protein translocase subunit SecA [secA]. 125 1102 IPR000185 GO:0005524|GO:0006605|GO:0006886
Bisa09g1718 1112 Gene3D - 524 830 IPR027417 -
Bisa09g1718 1112 CDD DEXDc_SecA 165 521 - -
Bisa09g1718 1112 Pfam SecA Wing and Scaffold domain 828 1099 IPR011116 GO:0016020|GO:0017038
Bisa09g1718 1112 PRINTS SecA protein signature 224 238 IPR000185 GO:0005524|GO:0006605|GO:0006886
Bisa09g1718 1112 PRINTS SecA protein signature 293 313 IPR000185 GO:0005524|GO:0006605|GO:0006886
Bisa09g1718 1112 PRINTS SecA protein signature 520 533 IPR000185 GO:0005524|GO:0006605|GO:0006886
Bisa09g1718 1112 PRINTS SecA protein signature 240 250 IPR000185 GO:0005524|GO:0006605|GO:0006886
Bisa09g1718 1112 PRINTS SecA protein signature 186 210 IPR000185 GO:0005524|GO:0006605|GO:0006886
Bisa09g1718 1112 PRINTS SecA protein signature 446 468 IPR000185 GO:0005524|GO:0006605|GO:0006886
Bisa09g1718 1112 PRINTS SecA protein signature 483 500 IPR000185 GO:0005524|GO:0006605|GO:0006886
Bisa09g1718 1112 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 212 375 IPR014001 -
Bisa09g1718 1112 ProSiteProfiles SecA family profile. 126 830 IPR014018 -
Bisa09g1718 1112 PANTHER SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM 116 1109 IPR000185 GO:0005524|GO:0006605|GO:0006886
Bisa09g1718 1112 Pfam SecA DEAD-like domain 137 508 IPR011115 GO:0005524|GO:0016020|GO:0017038
Bisa09g1718 1112 CDD SF2_C_secA 527 798 IPR044722 -
Bisa09g1718 1112 Gene3D - 355 475 - -
Bisa09g1718 1112 FunFam Protein translocase subunit SecA 833 948 - -
Bisa09g1718 1112 Gene3D Helical scaffold and wing domains of SecA 976 1100 - -
Bisa09g1718 1112 Gene3D Helical scaffold and wing domains of SecA 833 949 - -
Bisa09g1718 1112 ProSitePatterns SecA family signature. 609 624 IPR020937 GO:0006605|GO:0006886|GO:0016020
Bisa09g1718 1112 Gene3D - 145 522 IPR027417 -
Bisa09g1718 1112 FunFam Protein translocase subunit SecA 970 1099 - -
Bisa09g1718 1112 SUPERFAMILY Helical scaffold and wing domains of SecA 834 928 IPR036266 -
Bisa09g1718 1112 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 524 811 IPR027417 -
Bisa09g1718 1112 SMART SecA_PP_bind_2 354 465 IPR011130 GO:0016020|GO:0017038
Bisa09g1718 1112 NCBIfam preprotein translocase subunit SecA 151 923 IPR000185 GO:0005524|GO:0006605|GO:0006886
Bisa09g1718 1112 FunFam Protein translocase subunit SecA 144 365 - -
Bisa09g1718 1112 FunFam Preprotein translocase SecA subunit 355 475 - -
Bisa09g1718 1112 SUPERFAMILY Helical scaffold and wing domains of SecA 1001 1109 IPR036266 -
Bisa09g1718 1112 SMART SecA_DEAD_2 126 509 IPR011115 GO:0005524|GO:0016020|GO:0017038
Bisa09g1718 1112 SUPERFAMILY Pre-protein crosslinking domain of SecA 353 474 IPR036670 GO:0016020|GO:0017038
Bisa09g1718 1112 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 522 IPR027417 -
Bisa09g1718 1112 Pfam SecA preprotein cross-linking domain 361 465 IPR011130 GO:0016020|GO:0017038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1718 Bisa-ChrBisa09 25837115 25848979 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1718 09 25837115 25848979 Bisa09g1718 09 25837115 25848979 ECH