Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1717 ATGGAGTTGCCGGAGTTGCCGGAGTGCCCGGTGTGCCTCCAGACCTACAACAACGAGAGCACAATTCCTAGGGTACTTGCCTGTGGCCACTCGGTTTGTGAAGCTTGCCTTGTTGAACTTCCACAGCGATTCCCTAACACCATTCGGTGTCCTGCGTGTACCCGACTCGTCAGTTACCCAACTCAGCAAGGTCCCTCTGCTCTTCCCAAGAACATCGACCTGCTCAGACTCTGCCTCGAACACCCGTCTTCTTCTTCCGATGACTCCCTGAAATCGAAGCAGCAATCCGCAAAGAATGTCGATGATCACTCTGAATTTTGTACTTGGTTCTGGTTGGACGAGTTGTATGTCACGTGGAAGGATTGGGTTCTTCCACACGACGTCGTTTCGATTCAGTTCGAATCCGCTGGCCGCGATGGTCCTGGCCTTGGCTTTGTTCTACGAGGTCGATTCGGTTCAACTTCTTCGTCGAAAGGTAGGGTTTGTATTAAAGAAAACGAGAGCCTGAGCCTTGTCCCGATTGTTTCTTTACCGCCTGTTAGTCATTCTAAGTTCAAGTATAGTTATGTTGCACAAATAATGATGTGTTTGGAGGGCATGAAAGAGGCTCAGAGGGAAGAGTTAGCTTTAATCCTCAAAGCTCCCATGAAACAGAATAGGATATGTAAAGTGCATGGATTGTGGAGCGACACAATTGATGGGCATCTATATTTAGTGTGTGAGAGACGCAATGGTAGTCTTCCTGAGAAGTTAAGTGAGTTGAGAAATGGATTTGTCGGTCTAGCTGGAGATGGTTTGATCAAAGATGCACTTTTCAGTTTTGCAATGATAGTTATGAATATTTGTGAAGCGTTGATAGCTTTGCATACAGAAGGTCTGGTTGCGGGCTACTTTGGACTTTCTTGCTTCTGTTTTGATGAGCTTGGTGGCATTTATTTTGATTTGAATGAGGCATTAGCAACAGGAAGGAAGATGCACTGTGCTCTAATGGATGCTTTTTCTAGTGGCACTAGGAATACAGATAAACAAGAAGCAATTTTTGAGTATGTCTTGAAAGATGAGGTATTCGTAAGCCCAGAGCTTTTGTTTGAGTTAATGAAGGAGACTATTACCCTAGAGAGTGGGGATACAAGATACCCCATTGGGTATGGCTCTGATATATGGTCATTGGCTTGTGTACTGCTGTGGCTTCTTTTTGGAAATGCACTCCCCCAGTATACCTTGGAAATGAATGAAGAGAAGAAAGGCTTTAACTTTTCAGTTAGTTACATTCGTTGGGTGGAGAGAGTTAGTTCCTTTTTGGAAGATAAATTGGGAACAGAATATCAAGTGTTGAGGCAGACTCTTTGCAAATGTCTGGAAATAAATCCAGGAAGTCGCCCAGATGTGACATATGTAAGGAAATGCATGTGGGATATGTTGGTCAAACCTCAATTTGATGTTCTAGGCACCTTGGAGGTTGCAATAAATAGAAACAGTGCATATTGCTGCCTGATTCTGGGGGAGTTGTGTCGGTTGCCTCAGGAATGCTCAAAAGCACAGAGACAATGTGAGTTGAGGAACAGAGACGATGGAGGTCAACCAGATTTTGTTCATCATGGGGAGCAGAATTCTGATGAAGATGTTGTTGAACGCCTATCTAAGGGAATGACAGAACTTAAAGATCTTCGAGGCCATCTTGATTGTATCACAGGATTAGCTGTTGGAGGGGGATTTCTGTTTAGCTCCTCATTTGATAAAACTGTCCGTGTATGGTCATTGCAGGACTTTTCTCATTTACACACCTTTAGAGGTCATGAGAATAAAGTCGTGGCTCTAGTTTATGTGGATAATGAAGAACCATTGTGCATAAGTGGTGACAGTGGCGGGGGTATATTTATCTGGGGAATAACTTTCCCTCTTCAGAAGGATCCGTTGAGGAAATGGTACGAGCAGAAGGATTGGCGCTTTAGTGGTATCCACTCTCTGATTGTTTCAGAAAATCTTTGCCTTTACACTGGAAGTGGAGATAGATCAATAAAAGCTTGGTCATTGAAGGATGGAACGTTGATATGCACAATGAATGGTCATAAATCTGTAGTTTCCACACTTGCTATATGTGATGAGGTTCTTTACAGTGGCAGTTGGGATGGAACTATTAGGTTGTGGAATCTTATTGATCACAGCATGTTGACAGTCCTGGGGGAAGATATACCTGGAGAGATGAAATCTGTCCTGTCTATTACTGCCGATAGACATTTTCTTGTTGCGGCTCATGAGAATGGCTGCATAAAGGTCTGGAGAAATGATGTGTTCATGAATGTCAAAACATTGCATACTGGTGCCATTTTTGCTATCAGTATTCTGGACAAATGCCTCTATACAGGAGGCTGGGACAAAAAAGTTAATATACAGGAATTGTCAGGAGATGAGTTTCAATTAGTTGTCAATTCAATTGGATATATTCCTTGCAGTTCTGTTGTAACAGCTATATTATGTAGGCAAGGAAAATTATTTGTTGGATTTGCTGATAAGTCTATCAAGGTTTATCATGGGAATCGGTAG 2544 0.4289 MELPELPECPVCLQTYNNESTIPRVLACGHSVCEACLVELPQRFPNTIRCPACTRLVSYPTQQGPSALPKNIDLLRLCLEHPSSSSDDSLKSKQQSAKNVDDHSEFCTWFWLDELYVTWKDWVLPHDVVSIQFESAGRDGPGLGFVLRGRFGSTSSSKGRVCIKENESLSLVPIVSLPPVSHSKFKYSYVAQIMMCLEGMKEAQREELALILKAPMKQNRICKVHGLWSDTIDGHLYLVCERRNGSLPEKLSELRNGFVGLAGDGLIKDALFSFAMIVMNICEALIALHTEGLVAGYFGLSCFCFDELGGIYFDLNEALATGRKMHCALMDAFSSGTRNTDKQEAIFEYVLKDEVFVSPELLFELMKETITLESGDTRYPIGYGSDIWSLACVLLWLLFGNALPQYTLEMNEEKKGFNFSVSYIRWVERVSSFLEDKLGTEYQVLRQTLCKCLEINPGSRPDVTYVRKCMWDMLVKPQFDVLGTLEVAINRNSAYCCLILGELCRLPQECSKAQRQCELRNRDDGGQPDFVHHGEQNSDEDVVERLSKGMTELKDLRGHLDCITGLAVGGGFLFSSSFDKTVRVWSLQDFSHLHTFRGHENKVVALVYVDNEEPLCISGDSGGGIFIWGITFPLQKDPLRKWYEQKDWRFSGIHSLIVSENLCLYTGSGDRSIKAWSLKDGTLICTMNGHKSVVSTLAICDEVLYSGSWDGTIRLWNLIDHSMLTVLGEDIPGEMKSVLSITADRHFLVAAHENGCIKVWRNDVFMNVKTLHTGAIFAISILDKCLYTGGWDKKVNIQELSGDEFQLVVNSIGYIPCSSVVTAILCRQGKLFVGFADKSIKVYHGNR 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1717 847 SMART ring_2 9 53 IPR001841 -
Bisa09g1717 847 SMART WD40_4 589 629 IPR001680 GO:0005515
Bisa09g1717 847 SMART WD40_4 808 844 IPR001680 GO:0005515
Bisa09g1717 847 SMART WD40_4 549 586 IPR001680 GO:0005515
Bisa09g1717 847 SMART WD40_4 724 761 IPR001680 GO:0005515
Bisa09g1717 847 SMART WD40_4 635 677 IPR001680 GO:0005515
Bisa09g1717 847 SMART WD40_4 680 717 IPR001680 GO:0005515
Bisa09g1717 847 SMART WD40_4 762 799 IPR001680 GO:0005515
Bisa09g1717 847 SUPERFAMILY WD40 repeat-like 551 844 IPR036322 GO:0005515
Bisa09g1717 847 CDD RING-HC_TRIM32_C-VII 7 56 - -
Bisa09g1717 847 Gene3D - 634 847 IPR015943 GO:0005515
Bisa09g1717 847 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 687 718 - -
Bisa09g1717 847 ProSiteProfiles Trp-Asp (WD) repeats profile. 687 726 IPR001680 GO:0005515
Bisa09g1717 847 ProSiteProfiles Protein kinase domain profile. 140 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g1717 847 Gene3D Transferase(Phosphotransferase) domain 1 201 474 - -
Bisa09g1717 847 PRINTS G protein beta WD-40 repeat signature 573 587 IPR020472 -
Bisa09g1717 847 PRINTS G protein beta WD-40 repeat signature 664 678 IPR020472 -
Bisa09g1717 847 PRINTS G protein beta WD-40 repeat signature 704 718 IPR020472 -
Bisa09g1717 847 Pfam RING-type zinc-finger 9 51 IPR027370 -
Bisa09g1717 847 SUPERFAMILY RING/U-box 5 62 - -
Bisa09g1717 847 Gene3D - 531 632 IPR015943 GO:0005515
Bisa09g1717 847 Pfam WD domain, G-beta repeat 552 586 IPR001680 GO:0005515
Bisa09g1717 847 Pfam WD domain, G-beta repeat 683 717 IPR001680 GO:0005515
Bisa09g1717 847 PANTHER - 6 843 IPR044715 -
Bisa09g1717 847 ProSitePatterns Trp-Asp (WD) repeats signature. 704 718 IPR019775 -
Bisa09g1717 847 ProSiteProfiles Trp-Asp (WD) repeats profile. 556 595 IPR001680 GO:0005515
Bisa09g1717 847 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 88 IPR013083 -
Bisa09g1717 847 SUPERFAMILY Protein kinase-like (PK-like) 206 478 IPR011009 -
Bisa09g1717 847 ProSitePatterns Zinc finger RING-type signature. 28 37 IPR017907 -
Bisa09g1717 847 ProSiteProfiles Zinc finger RING-type profile. 9 54 IPR001841 -
Bisa09g1717 847 SMART serkin_6 145 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1717 555 843 Acyl Lipid Metabolism Gene Families AT3G18860 21.918 5.67e-07 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1717 09 25831645 25836800 Bisa09g1717 09 25831645 25836800 ECH