Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1598 ATGGATTTGCCTGGTGCTCAGCCGGGTCTTTCACTTGGGTTAAACACGCAGATTTCGTCACCGGCTTTGGGACGCCCTGCTAGTGATAATTTATTTTCCTTTCAACTGGATTCGACCTTCCTTAGTTCCTCGAATACAACCCCTTCTGTTCCGATGCAGTTGCTCGGGGAAACAGAAGGCGACGTTAGGGTCAAATACGGCGAAGAAGAAAAAGAAGAAGAAGAGGAGGATGAAGAGGAAGAAGGAGTGGAAGATGAAACAATCGACTTTATGGGTCGACCTATGTGTGTGAAGAGGCAATTAGAGGTACAGCCGAATTTTTCTCCGAATCCTCTGAAGCGGCTTGCTGTTGATTCGGGGCTTAATGCAAGGCGAGCTTCGGTGCAGGCTTGGGGCAACCAACCACTCGAGGTAGCAGACCCTGAGATTCATGAAATAATGGAGAAGGAAAAGCGGAGGCAGTTCAAAGGAATCGAACTGATTGCTTCTGAGAATTTCGTGTGCAGAGCTGTCATGGAAGCTCTGGGAAGCCATTTGACGAACAAGTACTCTGAGGGAATGCCTGGAGCTAAATACTACACAGGGAATCAGCATATTGATCAGATGGAATTGCTTTGCTGTAAGCGTGCATTGGCCTCCTTCGATCTTCATCCCAGCAAATGGGGCGTGAATGTTCAGCCTTACTCCTGTACTTCTGCGAACTTTGCGGTGTACACTGGTCTCTTGCATCCGGGGGATCGAATTATGGGTTTGGATTCGCCATCCGGTGGGCATTTGAGTCATGGATATTATACTCAAAGTGGAAAGAAAGTTTCTGCTGCATCTATATTCTTTGAAACTCTCCCTTACAGAGTCAATCCTCAAACAGGCTACTTAGACTACGAAAAACTTGAAGAAAAGGCTCTCGATTATCGCCCCAGAATACTTATATGCGGTGGGAGTTCGTATCCTAGAGAATGGGATTACGCAAGGTTTAGGCAGATTGCTGATAAATGTGGGGCTGTTTTGATGTGTGACATGGCTCATATTAGCGGTCTTGTGGCAGCTAAGGAAGTTGTCAGCCCATTTGATTACTGTGATATTGTTACTTCAACAACCCACAAAAGTCTCCGAGGTCCTAGGGGAGGTATTATCTTTTATAGAAGAGGTCCAAAACCAAGGAAGCAGGGCTTGGCTCTTAATCATGGAGATGATAGTAATTATGACTTTGAAGAAAAGATAAACTTTGCTGTATATCCCTCCTTACAAGGAGGTCCTCATAATAATCACATTGCTGCTCTTGCCATAGCATTAAAACAAGTTGCAACTCCAGAGTACAAAGTATATATGCAACAGGTGAAGAAAAATGCACAGGCGTTAGCATCTGCATTGCTGAAAAGAAAATGCAGACTGGTAACTGATGGAACTGACAATCACTTGTTGCTGTGGGATCTAACTGCACTTGGCTTAATTGACAGAAACTATGAGAAGGTTTGTGAGGCATGTAGCATCACACTCAACAAATGTGCCATTTATGGCTCTATTTCGCCTGGAGGAGTGAGAATTGGTACTCCTGCAATGACAACAAGAGGTTGCTTAGAGGATGATTTTGAGACCATAGGGGATTTTCTTCTGAAGGCAGCACAGATTACCAGCAATATACAGAGGGAACATGGAAAATCTTGCAAAGATTTCCTCAAAGGCCTTCAAAATAATAAAGATATTACTGAACTCAGAAATCAGGTTGAGACATTTGCTTCCCAGTTTGCAATGCCAGCATGCGATATTTGA 1770 0.4418 MDLPGAQPGLSLGLNTQISSPALGRPASDNLFSFQLDSTFLSSSNTTPSVPMQLLGETEGDVRVKYGEEEKEEEEEDEEEEGVEDETIDFMGRPMCVKRQLEVQPNFSPNPLKRLAVDSGLNARRASVQAWGNQPLEVADPEIHEIMEKEKRRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGAKYYTGNQHIDQMELLCCKRALASFDLHPSKWGVNVQPYSCTSANFAVYTGLLHPGDRIMGLDSPSGGHLSHGYYTQSGKKVSAASIFFETLPYRVNPQTGYLDYEKLEEKALDYRPRILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKEVVSPFDYCDIVTSTTHKSLRGPRGGIIFYRRGPKPRKQGLALNHGDDSNYDFEEKINFAVYPSLQGGPHNNHIAALAIALKQVATPEYKVYMQQVKKNAQALASALLKRKCRLVTDGTDNHLLLWDLTALGLIDRNYEKVCEACSITLNKCAIYGSISPGGVRIGTPAMTTRGCLEDDFETIGDFLLKAAQITSNIQREHGKSCKDFLKGLQNNKDITELRNQVETFASQFAMPACDI 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1598 589 SUPERFAMILY PLP-dependent transferases 125 586 IPR015424 -
Bisa09g1598 589 ProSitePatterns Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 360 376 IPR019798 GO:0030170
Bisa09g1598 589 CDD SHMT 140 547 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Bisa09g1598 589 Pfam Serine hydroxymethyltransferase 136 536 IPR039429 -
Bisa09g1598 589 MobiDBLite consensus disorder prediction 1 29 - -
Bisa09g1598 589 MobiDBLite consensus disorder prediction 10 29 - -
Bisa09g1598 589 FunFam Serine hydroxymethyltransferase 165 383 - -
Bisa09g1598 589 Hamap Serine hydroxymethyltransferase [glyA]. 135 586 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Bisa09g1598 589 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 129 587 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Bisa09g1598 589 Coils Coil 66 86 - -
Bisa09g1598 589 Gene3D Aspartate Aminotransferase, domain 1 140 585 IPR015422 GO:0003824
Bisa09g1598 589 Gene3D - 165 444 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1598 Bisa-ChrBisa09 23785208 23788834 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1598 09 23785208 23788834 Bisa09g1598 09 23785208 23788834 ECH