Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1569 ATGAAGGTTCACCAGCACAAGAAGTGCATGTGGGTGCACCACATAGACATCATCTTCGTGCTTGCTGTATCCAAGGACGCTTCTTTGCTTTACTCTGCTTCGTGGGATCGGCATTCAAAATTTAGAGAACTTCCTATTTCAAGTGCTTGGAGTATGATTATGGAACAGTTTAACAACGATGATCTTGAGTACGTAGTAGGCGACTATTACGACGTCCCTGATTTTGAAGACGGTGATCCTCCCGCTGACTCTGACCCTCAAAATAACAGTGGTTTCCATTCTCCGGACTCGGATTTCGAAGATGATTTTGAAACGAGTAAGTCGAAGACTGATACTACTGCTTTGGAAGCCAGGAACGGGAAAGATATGCAGGGGATTCCATGGGAGAGGCTTAATTACACCAGAGACGAATACCGTGAGACTCGATTGAAGCAATACAAGAACTATGAAAACCTCTCACTCTCTCGTGAGAAGATCGACAAGGAGAGCCTGGAAGTGCAGAAAGGGAAGAGCTTCTATGACTTCCAGTTCAATACGAGGATGGTCAAATCAACAATTGTGCATTTTCAGCTGAGGAATTTGTTATGGGCAACATCGAAGCATGATGTATACCTTATGCAAAACTACTCTGTGATGCATTGGTCCCCTATACTCCAAAGGGGTAAAGAAGTACTCAATGTGGCGAAACAAATTGTTCCAACCATTAAGCGCCCCGGATTTTTGGCTCAGCCTTTCTCCAGAGTGCAAATAAGCACCATGGCTGTTAAGGAAAATTTGATGGTAGCAGGTGGCTTCCAGGGTGAGCTTATTTGTAAGAATCTGAATCATTCTGGAGTTGCATTCTGCAATAAAATAACTACTGATGACAATGCTATAACTAATGCTGTGGATGTTTACCGCAACCCGAGTGGTTCGTTGAAGGTCATGACAGCGAATAATGACGCTCAAGTTCGGGTTTTCGATGCTGAGAATTTTGCTTCACTGGGTTGTTTCAAATATGATTGGTCTGTCAACAGTACCTGCATTAGTCCGGATGGAAAGTTATTAGCTGTTCTTGGGGACAGTGCCGAGTGCTTGTTAGCTGATGCTAACACCGGCAAGGTTACAGGGAGCCTAAGAGGGCACTTGGACTACTCGTTTGCCTCTGATTGGCACCCAGATGGACGGATATTGGCTACTGGGAATCAGGACAAAACATGTAGATTGTGGGACATTAGAAATCTTTCACAGTCCATGGCTGTACTGAAGGGAAGAATGGGTGCAATAAGAGCCTTAAGGTTCACTTCGGATGGACGGTTTTTGGCCATAGCTGAGCCAGCAGATTTCGTCCATATTTTTGACTCTCGGTTTGGTTATGTCGAAGCACAAGAGATAGATCTATTTGGTGAGATCGCTGGCATATCGTTTAGCCCTGACACAGAGGCTCTGTTTGTTGGTATTGCTGACCGCACCTATGGCAGCTTGTTGGAGTTCAACAGGAAGCACTGCAATCAATATTTAGACTCCATCTTTTAG 1515 0.4462 MKVHQHKKCMWVHHIDIIFVLAVSKDASLLYSASWDRHSKFRELPISSAWSMIMEQFNNDDLEYVVGDYYDVPDFEDGDPPADSDPQNNSGFHSPDSDFEDDFETSKSKTDTTALEARNGKDMQGIPWERLNYTRDEYRETRLKQYKNYENLSLSREKIDKESLEVQKGKSFYDFQFNTRMVKSTIVHFQLRNLLWATSKHDVYLMQNYSVMHWSPILQRGKEVLNVAKQIVPTIKRPGFLAQPFSRVQISTMAVKENLMVAGGFQGELICKNLNHSGVAFCNKITTDDNAITNAVDVYRNPSGSLKVMTANNDAQVRVFDAENFASLGCFKYDWSVNSTCISPDGKLLAVLGDSAECLLADANTGKVTGSLRGHLDYSFASDWHPDGRILATGNQDKTCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAIAEPADFVHIFDSRFGYVEAQEIDLFGEIAGISFSPDTEALFVGIADRTYGSLLEFNRKHCNQYLDSIF 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1569 504 MobiDBLite consensus disorder prediction 95 116 - -
Bisa09g1569 504 MobiDBLite consensus disorder prediction 75 117 - -
Bisa09g1569 504 PANTHER WD REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_8G05640)-RELATED 59 501 - -
Bisa09g1569 504 FunFam WD-40 repeat family protein 285 501 - -
Bisa09g1569 504 ProSitePatterns Trp-Asp (WD) repeats signature. 391 405 IPR019775 -
Bisa09g1569 504 Pfam WD domain, G-beta repeat 367 404 IPR001680 GO:0005515
Bisa09g1569 504 SUPERFAMILY WD40 repeat-like 9 484 IPR036322 GO:0005515
Bisa09g1569 504 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 372 407 - -
Bisa09g1569 504 SMART WD40_4 266 321 IPR001680 GO:0005515
Bisa09g1569 504 SMART WD40_4 408 447 IPR001680 GO:0005515
Bisa09g1569 504 SMART WD40_4 324 362 IPR001680 GO:0005515
Bisa09g1569 504 SMART WD40_4 365 404 IPR001680 GO:0005515
Bisa09g1569 504 SMART WD40_4 5 43 IPR001680 GO:0005515
Bisa09g1569 504 Gene3D - 260 500 IPR015943 GO:0005515
Bisa09g1569 504 ProSiteProfiles Trp-Asp (WD) repeats profile. 372 413 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1569 Bisa-ChrBisa09 23350128 23361193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1569 290 484 Miscellaneous Gene Families AT5G08390 26.531 4.36e-12 67.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1569 09 23350128 23361193 Bisa09g1569 09 23350128 23361193 ECH