Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1353 ATGCTTATGCTTCGAAGTGGTGTACAAATAACAAGGGCGTTTGTGCTTCTTTATTTGTCTGTGTCTTGGAGCACTCAAAGGGGAAAGGGTTTGATGATTGGGCAATTAGGTCGCCAATGCAATGATTTTGGTATAAAGAGAAGGCATATATCGGGTACTGTAAACCCAACCGCATCCAATCAGAACCCATCTTCCTCAATTCTCCTGTCACGATTCCAAGGTGATCTACCGAGTTCTCTCTCTTCAGTCGTCTCTCTGAGATACCTTCTCCGGTACTGTTATAAGTTACTCTCGAGGTTTGTTGCCAGTGTGTACATATCCAACATGCAGGCATCACGGGCAAGGTTGTTCAAGGAGTACAAAGAGGTTCAACGAGAGAAAGCAGCCGACCCAGATATTCAACTAGCCTGTGATGATTCTAACATTTTCAAATGGACAGCCCTTATTAAGGGACCATCAGAGACTCCTTATGAGGGTGGTGTCTTCCAGCTTGCTTTTGCTGTTCCAGAACAGTATCCTCTACAACCTCCTCAAGTGCGGTTCCTGACTAAAATATTTCACCCAAATGTGCATTTTAAGACAGGCGAGATTTGTCTGGATATTTTGAAAAATGCTTGGAGCCCAGCTTGGACGCTTCAATCTGTCTGTAGGGCTATAATAGCTTTGATGGCCCATCCAGAACCTGACAGCCCACTGAACTGTGATTCAGGTAATCTTCTGCGTTCAGGCGATGTTAGAGGGTACCAGTCCATGGCGAGGATGTATACTAGACTCGCGGCAATGCCAAAGAAAGGCTGA 798 0.4536 MLMLRSGVQITRAFVLLYLSVSWSTQRGKGLMIGQLGRQCNDFGIKRRHISGTVNPTASNQNPSSSILLSRFQGDLPSSLSSVVSLRYLLRYCYKLLSRFVASVYISNMQASRARLFKEYKEVQREKAADPDIQLACDDSNIFKWTALIKGPSETPYEGGVFQLAFAVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1353 265 FunFam protein PEROXIN-4 isoform X1 109 260 - -
Bisa09g1353 265 Gene3D Ubiquitin Conjugating Enzyme 108 260 IPR016135 -
Bisa09g1353 265 SMART ubc_7 114 261 - -
Bisa09g1353 265 SUPERFAMILY UBC-like 109 261 IPR016135 -
Bisa09g1353 265 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 110 242 - -
Bisa09g1353 265 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 186 202 IPR023313 -
Bisa09g1353 265 Coils Coil 106 126 - -
Bisa09g1353 265 CDD UBCc 115 256 IPR000608 -
Bisa09g1353 265 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 111 261 IPR000608 -
Bisa09g1353 265 Pfam Ubiquitin-conjugating enzyme 115 255 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1353 Bisa-ChrBisa09 19512988 19517735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1353 115 231 Miscellaneous Gene Families AT3G17000 35.537 4.35e-15 72.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1353 09 19512988 19517735 Bisa09g1353 09 19512988 19517735 ECH