Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1312 ATGGGCATACAACCGTTTCACCTCACTCGTATTCTTCCTCTTCGCATAATCATGGATCAAAACGACGATATCAGCGCTCCTCATTCCATGGGAACCACAATTATCGGTGTCACTTACAATGGTGGTGTTGTTCTCGGAGCCGACTCTCGAACCAGCACTGGAGTATATGTTGCAAACAGGGCATCAGACAAAATTACACAGCTTACTGATAATGTCTATGTTTGTCGCTCTGGATCGGCTGCAGATTCTCAGATAGTATCAGACTATGTGCGCTACTTCCTTCACCAGCACACCATACAGCTCGGACAACCTGCAACAGTCAAAGTTGCTGCAAACCTTGTCCGACTTCTCTCCTATAACAACAAGAATTTCTTAGAGACTGGGTTAGTTGTTGGTGGGTGGGACAAATATGAAGGTGGTCAAATTTATGGAGTTCCTCTTGGTGGAACGATAGTTCAACAACCTTTTGCTATTGGAGGATCTGGCTCCAGTTACTTGTATGGATTCTTTGACCAAGCATGGAAAGAAGGAATGACCAAGGATGAGGCTGAGGATTTAGTAAAAAAGGCAGTTTCACTTGCCATTGCACGTGATGGTGCAAGTGGGGGTGTTGTCCGAACAGTCACTATAAATTCGGAGGGAGTGAATAGGAAGTATTATCCTGGGGACCAGCTTCCTATGTGGCATGAGGAGCTGGAGCCCCAAAACTCCTTGCTGGACATTCTCAGTGCCCCTCAGCCTATGAGCATCTGA 753 0.4622 MGIQPFHLTRILPLRIIMDQNDDISAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLETGLVVGGWDKYEGGQIYGVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKEGMTKDEAEDLVKKAVSLAIARDGASGGVVRTVTINSEGVNRKYYPGDQLPMWHEELEPQNSLLDILSAPQPMSI 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1312 250 CDD proteasome_beta_type_6 32 219 - -
Bisa09g1312 250 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 17 229 IPR029055 -
Bisa09g1312 250 ProSiteProfiles Proteasome beta-type subunit profile. 31 210 IPR023333 -
Bisa09g1312 250 PANTHER METALLOPROTEASE TLDD 24 229 IPR023333 -
Bisa09g1312 250 Pfam Proteasome subunit 30 210 IPR001353 GO:0005839|GO:0051603
Bisa09g1312 250 ProSitePatterns Proteasome beta-type subunits signature. 35 82 IPR016050 GO:0005839|GO:0051603
Bisa09g1312 250 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 32 231 IPR029055 -
Bisa09g1312 250 PRINTS Proteasome component signature 160 171 IPR000243 GO:0004298|GO:0005839|GO:0051603
Bisa09g1312 250 PRINTS Proteasome component signature 196 207 IPR000243 GO:0004298|GO:0005839|GO:0051603
Bisa09g1312 250 PRINTS Proteasome component signature 171 182 IPR000243 GO:0004298|GO:0005839|GO:0051603
Bisa09g1312 250 PRINTS Proteasome component signature 39 54 IPR000243 GO:0004298|GO:0005839|GO:0051603
Bisa09g1312 250 FunFam Proteasome subunit beta 32 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1312 Bisa-ChrBisa09 18919735 18925824 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1312 09 18919735 18925824 Bisa09g1312 09 18919735 18925824 ECH