Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1209 ATGGGGAGGGGAGGGATTCAACTATCTGATGACAAAGGAAATAGGCTTTTGTCTATCTCTGATTTGGGGTCTCAATGGAGTGTTCAAGAGGGGTATTATCATCCCGGTGGCTTATTTGCCAGCGTAGGTCAGATGGGAATGGGGTTTGGTGTTCAATCCAATGCTTCTGATCCTCGCAACAATGGTGAGAAAGTTCCTTATACTGAATTGTACGTTAAGTATGTGCAATCAGAGTCACAGGGGAAAGTTGAGATTGCTGGAGTTGAGGAGAAGGAAGGGGTTAAAAGCAGGAACAAGGATGGCCTTAAACTGAAAATTAAGATCAGAAATCCATCGCTGAGGAGGTTGATTAGTGGCGCCATAGCTGGGGCGGTGTCCCGGACAGCCGTGGCGCCTTTGGAGACTGTAAGGACTCATTTAATGGTTGGGAGTAGTGGCCATTCTACTGGGGAGGTGTTCAGCAATATTATGAAGACTGATGGGTGGAAGGGATTGTTTAGGGGTAATCTCGTTAATGTGATTCGTGTTGCACCTAGTAAGGCCATAGAGCTATTTGCTTATGATACAGTCAACAAGAACCTCTCACCAAAGCCCGGGGAACAGCCAAAACTCCCTGTTCCTGCATCACTAGTGGCTGGTGCCTGTGCAGGAGTTAGTTCTACTGTATGCACATATCCTCTTGAGTTACTCAAGACTCGACTCACTATTCAGAGAGGTGTTTATGATGGTCTCCTAGATGCATTCGTAAAAATAATTCGAGACGAGGGCCCTGGAGAACTTTATCGAGGCCTCGCTCCCAGCCTTATCGGAGTAATTCCATACGCTGCCACCAATTACTTTGCCTACGACACTCTACGGAAAGCCTACCGAAAAATTTTCAAGCAAGAGAAGATTGGCAACATTGAAACCCTATTAATTGGATCAGCAGCCGGTGCTATTTCGAGTAGTGCAACATTTCCACTTGAGGTAGCTCGCAAGCACATGCAAGTGGGAGCTCTGAGTGGAAGGCAGGTTTACAAGAATGTGATTCATGCCCTTGCATGCATACTTGAACAAGAAGGGATTCCAGGTTTATACAGAGGGTTGGGACCAAGCTGCATGAAGTTAGTACCAGCCGCTGGAATCTCTTTCATGTGCTATGAATTCTGCAAGAGGATACTGATTGAGAAAGATGACGAGGAATAG 1185 0.4624 MGRGGIQLSDDKGNRLLSISDLGSQWSVQEGYYHPGGLFASVGQMGMGFGVQSNASDPRNNGEKVPYTELYVKYVQSESQGKVEIAGVEEKEGVKSRNKDGLKLKIKIRNPSLRRLISGAIAGAVSRTAVAPLETVRTHLMVGSSGHSTGEVFSNIMKTDGWKGLFRGNLVNVIRVAPSKAIELFAYDTVNKNLSPKPGEQPKLPVPASLVAGACAGVSSTVCTYPLELLKTRLTIQRGVYDGLLDAFVKIIRDEGPGELYRGLAPSLIGVIPYAATNYFAYDTLRKAYRKIFKQEKIGNIETLLIGSAAGAISSSATFPLEVARKHMQVGALSGRQVYKNVIHALACILEQEGIPGLYRGLGPSCMKLVPAAGISFMCYEFCKRILIEKDDEE 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1209 394 ProSiteProfiles Solute carrier (Solcar) repeat profile. 110 193 IPR018108 -
Bisa09g1209 394 ProSiteProfiles Solute carrier (Solcar) repeat profile. 298 386 IPR018108 -
Bisa09g1209 394 PANTHER SOLUTE CARRIER FAMILY 25 105 387 - -
Bisa09g1209 394 SUPERFAMILY Mitochondrial carrier 111 382 IPR023395 -
Bisa09g1209 394 Gene3D Mitochondrial carrier domain 107 392 IPR023395 -
Bisa09g1209 394 Pfam Mitochondrial carrier protein 298 390 IPR018108 -
Bisa09g1209 394 Pfam Mitochondrial carrier protein 112 194 IPR018108 -
Bisa09g1209 394 Pfam Mitochondrial carrier protein 204 291 IPR018108 -
Bisa09g1209 394 PRINTS Mitochondrial carrier protein signature 128 142 IPR002067 GO:0055085
Bisa09g1209 394 PRINTS Mitochondrial carrier protein signature 219 237 IPR002067 GO:0055085
Bisa09g1209 394 PRINTS Mitochondrial carrier protein signature 261 279 IPR002067 GO:0055085
Bisa09g1209 394 PRINTS Mitochondrial carrier protein signature 168 188 IPR002067 GO:0055085
Bisa09g1209 394 PRINTS Mitochondrial carrier protein signature 307 329 IPR002067 GO:0055085
Bisa09g1209 394 PRINTS Mitochondrial carrier protein signature 115 128 IPR002067 GO:0055085
Bisa09g1209 394 ProSiteProfiles Solute carrier (Solcar) repeat profile. 204 288 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1209 Bisa-ChrBisa09 17411378 17414350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1209 297 394 Organic Solute Cotransporters AT4G32400 30.392 1.88e-06 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1209 09 17411378 17414350 Bisa09g1209 09 17411378 17414350 ECH