Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1188 ATGGCGCCGAGCACGATCCGGAAGGCGATTGGGGCTGTGAAGGACCAGACCAGTATTGGGATAGCGAAGGTTGCTAGCAATTTGGCACCGGAGCTTGAGGTAGCGATCGTCAAAGCGACTAGTCACGACGATGACCCGGCCAGCGAGAAATACGTGCGGGAGATCTTGAGCTTGGTGTCTTTTTCTCGGGGATATGTTCATGCTTGCGTTTCCACGGTGTCGAAGCGTTTGGGGAAGACCCGGGACTGGATTGTGGCGCTTAAGGCTCTGATGCTTGTGCACAGGTTGATGAATGAGGGTCCTCCCTTGTTTCAGGAGGAGATCTTGTATGCCACGAGGAGGGGAACAAGGCTTCTCAACATGTCCGATTTCAGGGATGAGGCTCACTCTAGCTCATGGGATCATTCGGCTTTCGTCAGGACCTATGCTATGTATCTGGATCAACGGCTCGAGTTGATGCTGTTTGACAGGAAAAGTGGGAGTGTTGGGGACGGTAGTGGCGGAGGTAGCGTCGACGACAGATTTGGGGGCAGAGATAATTTCAGGTCGCCGCCTCCGAGGCCGTATGAGAATGAGTATGGAGATTTTAGGGGCGAAAGTGGATATGGAAACTATGGGATGCGACGGACAAGATCGTTCGGCGATATGACCGAGACGGCGGGCCGAGAGGGTAGAGAGGAGAAAAAGGTTGTGACTCCGTTGAGAGATATGAAGCCGGAGAGGATTTTTGGCAAGATGGGTCATCTGCAGAGGCTGTTGGATCGGTTCTTGGCTTGTAGGCCAACGGGATTGGCAAAGAATAGTAGGATGATTTTAATTGCATTATATCCTGTAGTCAGGGAGAGCTTTCAGTTGTATGCTGATATTTGCGAGGTTTTGGCCGTTTTGCTTGACAAATTCTTTGATATGGAATACCCTGATTGTGTGAAGGCGTTTGATGCTTATGCCAGTGCAGCTAAGCAGATCGATGAGCTTGTTACCTTCTATAATTGGTGCAAGGATACTGGTGTGGCAAGATCATCAGAGTACCCAGAAGTTCAGAGGATTACCAGCAAGTTACTGGAGACACTGGAGGAGTTCGTGAGGGATAGGGCAAAGAGACCAAAAAGTCCAGAGAGGAAGGAGGAACCTCAGCCTGTGGCTATAGAAGAGGAGCCAGAACCAGATATGAATGAAATAAAGGCGTTGCCTGCACCTGAGGATCCCACCCCTCCTCCTCCACCACAGCCAGAGCCAGAGCCTAAGCCACAGCAACAAGTTACAGAAGACTTGGTGAATCTAAGAGATGATGCAGTCACTGCAGATGATCAAGGCAATAGATTGGCTTTGGCACTCTTTGCTGGTACCCCAGCTAATAATAATGCAAATGGATCATGGGAAGCATTCCCTTCAAACGGACAGCCAGAAATGACTTCTGCTTGGCAAACCCCGGCTGCAGAACCTGGGAAGGCTGATTGGGAATTGGCATTGGTTGAGACTGCTAGCAATTTGTCAAGGCAGAAGGCAGCTTTAGGTGGTGGACTTGATCCGCTATTGTTGAATGGCATGTACGATCAAGGAATGGTGAGACAGCATACCAGCACTGCTCAACTGAGTGGAGGGAGTGCAAGCAGTGTGGCATTGCCAGGACCAGGAAAGAGCACAACCCCAGTTCTAGCCCTCCCAGCCCCAGATGGATCTGTGCAGGCTGTTAATCAGGATCCATTTGCTGCATCATTAACCATTCCACCCCCATCATATGTGCAGATGGCAGATATGGAGAAGAAGCAGAATTTGCTTGTACATGAGCAGCAGCTGTGGCAGCAATATGCGAGGGATGGAATGCAAGGTCAAACTAGCTTGGCCAAACTCAGTGGAACTGGATATTATGCAGGGGCTCCTATGCCAACGATGCCTTACGGCATGCCCCCAGTCAACGGAATGGGACCTCCCAACGGGTACTACTATACACCTTACTGA 1959 0.5048 MAPSTIRKAIGAVKDQTSIGIAKVASNLAPELEVAIVKATSHDDDPASEKYVREILSLVSFSRGYVHACVSTVSKRLGKTRDWIVALKALMLVHRLMNEGPPLFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLELMLFDRKSGSVGDGSGGGSVDDRFGGRDNFRSPPPRPYENEYGDFRGESGYGNYGMRRTRSFGDMTETAGREGREEKKVVTPLRDMKPERIFGKMGHLQRLLDRFLACRPTGLAKNSRMILIALYPVVRESFQLYADICEVLAVLLDKFFDMEYPDCVKAFDAYASAAKQIDELVTFYNWCKDTGVARSSEYPEVQRITSKLLETLEEFVRDRAKRPKSPERKEEPQPVAIEEEPEPDMNEIKALPAPEDPTPPPPPQPEPEPKPQQQVTEDLVNLRDDAVTADDQGNRLALALFAGTPANNNANGSWEAFPSNGQPEMTSAWQTPAAEPGKADWELALVETASNLSRQKAALGGGLDPLLLNGMYDQGMVRQHTSTAQLSGGSASSVALPGPGKSTTPVLALPAPDGSVQAVNQDPFAASLTIPPPSYVQMADMEKKQNLLVHEQQLWQQYARDGMQGQTSLAKLSGTGYYAGAPMPTMPYGMPPVNGMGPPNGYYYTPY 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1188 652 FunFam Clathrin coat assembly protein 3 156 - -
Bisa09g1188 652 FunFam putative clathrin assembly protein At2g25430 228 373 - -
Bisa09g1188 652 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Bisa09g1188 652 Pfam ANTH domain 31 152 IPR011417 GO:0005543
Bisa09g1188 652 Pfam ANTH domain 202 363 IPR011417 GO:0005543
Bisa09g1188 652 Gene3D - 2 156 IPR008942 -
Bisa09g1188 652 Gene3D ANTH domain 225 373 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Bisa09g1188 652 MobiDBLite consensus disorder prediction 362 421 - -
Bisa09g1188 652 MobiDBLite consensus disorder prediction 362 391 - -
Bisa09g1188 652 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Bisa09g1188 652 SUPERFAMILY GAT-like domain 233 363 - -
Bisa09g1188 652 SMART enth_2 30 160 IPR013809 -
Bisa09g1188 652 MobiDBLite consensus disorder prediction 398 415 - -
Bisa09g1188 652 MobiDBLite consensus disorder prediction 161 195 - -
Bisa09g1188 652 CDD ANTH_N_AP180_plant 32 152 - -
Bisa09g1188 652 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 594 IPR045192 GO:0048268|GO:0072583
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1188 Bisa-ChrBisa09 17145169 17147127 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1188 09 17145169 17147127 Bisa09g1188 09 17145169 17147127 ECH