Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1178 ATGAAGCATAGTTCGTCTGAGGCAGTCCCGTCTCTATCTTCTGCATCCTCTGTGACAGACCAAATCCACGTTGCCACTTCATCGTCATCGTTGGCGTCACCGGACAAGCCCGCTTTGGGGTCCTCGGTGGCGGCTCCTGAGGACTTGGCTATGGGGACGAGGGACGGTGGCGGCGCCCAGGAGACTGTGACCGTTGAACGCCGGGGCGAGTACTCCGCCGTTTGCCGATGGACGGTTCATAATTTTCCACGAATAAAAGCTAGGGCACTGTGGAGCAAGTACTTCGAGGTTGGAGGTTATGATTGCCGTCTCTTGGTATACCCTAAGGGTGACTCCCAAGCCTTGCCAGGCTACATCTCCATCTACCTCCAAATCATGGACCCTCGTGGCACTTCGTCGTCCAAATGGGACTGCTTTGCTAGCTACCGGTTAGCAATCGCGAACGTCACCGACGATTCCAAGACCATTCATCGGGATTCGTGGCATCGGTTCTCAAGTAAGAAGAAATCACACGGGTGGTGTGATTTCACGCCTTCCTCAACTGTAATGGATCCAAAATTGGGTTATTTGTTTAATAATGATTCGGTATTGATAACGGCCGATATACTAATTCTTAATGAGTCGATTAATTTTACTCGAGATAACAATGAGTTGCAATCCTCGGCATCTTCTTCTTCATCCATGATATCTTCCTCTGTTGTTGCGGGCCCTGCGTCCGACGTGTTGAGTGGAAAATTCACTTGGAAAGTGCATAATTTCAGTTTATTCAAGGATATGATAAAAACCCAGAAGATAATGAGCCCAGTTTTTCCAGCTGGGGAGTGTAATTTGAGGATTAGTGTGTATCAGAGCTCGGTTAATGGGGTCGAATATTTGTCAATGTGCTTGGAAAGCAAAGATACGGACAAGACGGTGATGTTGTCTGATAGGAGTTGCTGGTGTTTATTTCGAATGTCAGTCTTGAATCAGAAGCCAGGTTCAAATCACATGCATAGAGATTCGTATGGACGGTTTGCAGCTGACAATAAGAGTGGTGATAATACAAGCTTGGGATGGAATGACTATATGAAGATGTCTGATTTTATTGGGCCTGATTCAGGGTTTCTGGTGGATGATACTGCAGTTTTTAGTACATCATTTCATGTCATTAAAGAGTTTAGTAGCTTCTCTAAGAATGGGGCTTTAATTGCAGGGAGAAGTGGGAGTGGGACAAGGAAATCAGATGGCCACATAGGAAAGTTCACATGGAGGATTGAAAACTTCACAAGATTAAAGGATTTATTGAAAAAGAGAAAAATTACAGGTCTTTGCATCAAGAGCAGGAGGTTTCAGATTGGTAATCGGGATTGTCGTCTCATAGTTTATCCCCGAGGGCAGTCCCAGCCACCATGCCACCTTTCAGTGTTTCTTGAAGTTACAGATTCAAGAAATACTTCCAGTGATTGGAGTTGTTTTGTTAGTCATCGGTTGTCAGTTGTGAACCAGAAGATGGAGGAGAAGTCTGTCACTAAGGAATCTCAGAACCGCTACTCCAAGGCTGCAAAAGATTGGGGCTGGCGTGAATTTGTGACCCTTACTAGCCTCTTTGATCAAGATTCAGGTTTTCTTGTCCAGGACACTGTTGTATTCTCTGCGGAAGTTCTCATATTGAAAGAGACTTCAGTAATGCAGGATTTGGTTGATCATGATTCTGAGATGAGTAGTAGCGGTTCCCTTACCGATAAGAATGTAAAAAGAAGTACATTTACATGGAAAGTGGAGAATTTCCTGTCATTTAAGGAAATAATGGAGACTCGAAAGATCTTCAGTAAATTCTTTCAGGCTGGTGGATGTGAACTTCGGATTGGTGTCTATGAGTCCTTTGACACCATATGTATATATCTAGAGAGTGATCAGGCTGTTGGCAGTGATCCAGATAAAAACTTTTGGGTCAAATACAGGATGGCTGTTGTGAATCAAAAGAATCCAGCTAAGACTGTGTGGAAGGAATCCTCTATTTGCACAAAGACATGGAATAATTCTGTTTTGCAATTCATGAAGGTTTCTGATATATTAGAAGCAGATGCAGGGTTTCTAGTCCGTGACACTGTTGTTTTTGTTTGTGAAATCTTGGATTTCTGCCCTTGGTTTGAGTTTTCAGACTTGGAGGTTTTAGCTTCAGATGATGATCAGGATGCTTTGACAACAGATCCTGATGAACTCATTGACTCTGAAGATAGTGGAGGAATAAGTGGAGATGAAGAAGACATTTTCAGAAATCTTCTTTCCAGAGCTGGATTTCACCTTACGTATGGAGATAATCCTTCACAGCCACAAGTTACTTTAAGAGAAAAGCTTTTAATGGATGCTGGTGCAATTGCTGGGTTTCTGACTGGACTCCGGGTTTATCTTGATGATCCTGTGAAAGTAAAGCGGTTGCTTCTTCCAACCAAGCTCTCTAGTAGTTGTGATGGGAAGGTCACCAAGGCTGATGAATCTTCCCCCAGTTTGATGAATTTGCTGATGGGAGTTAAAGTCTTGCAGCAGGCAATTATTGATTTACTTTTGGATATAATGGTGGAATGTTGCCAACCTTCGGAAGGGTCTTCTGTTGCTGATTCTTCTAATGCATGCTCAAAAGAATCTCCTGATGGCAGTGGAGCTGCTAGTCCTCTCAAACGTGATAGAGAAAATGAGGCAGCAGAATCTGCACAATTTCCTGTCTATGAGAGATTGGATTCTGTTGACGAAGAAAGTAGTAGTACTAATGCTGTACAAAGCTCTGAATTAAATGGTAGTGCTATTCCAGAGAAAGCTCTTCCTGGACAACCTATTTGTCCTCCAGAAACATCAGCTTCTGTTTCAGAAAATGCATCATTTCGGTCGAAGGCCAAGTGGCCAGAACAGTCTGAGGAGCTCTTAGGTTTGATTGTAAACTCACTTAGAACCCTGGATGGGGCTGTTCCGCAAGGCTGCCCTGAGCCACGACGGCGGCCTCAATCAGCACAGAAAATTTCCCTTGTGTTGGACAAAGCTCCTAAGCATTTGCAAGCTGACCTGGTGGCTTTGATTCCCAAATTGGTTGAGCATTCAGAACATCCACTGGCTGCCTATGCACTTCTTGAGCGACTTCAAAAGCCAGATGCAGAACCTGCCTTGCGAATACCTGTTTTTGGGGCTCTTAGTCAACTGGAGTGTGGTAGTGAAGTGTGGGAGCGTATTCTATTCCAGTCATTTGAGCTTTTGAGAGACTCAAATGATGAACCTCTTGCTGCAACTGTAGATTTTATATTCAAAGCAGCGTCTCAGTGTCAACATCTCCCTGAAGCAGTCAGATCTGTTCGCGTCAGGCTCAAAAATCTAGGTCTTGAGGTTTCACCTTGTGTTCTTGACTTTTTGAGTAAAACATTAAATAGTTGGGGGGATGTTGCTGAAACTATACTGAGGGACATTGATTGTGATGATGACTTGGGTGACAGTTGCTCAGCACTGTCATGTGGGCTTTTCTTATTTGGTGAACACGGCACTGCTCCTACTGGCCTGCATGTGGTTGATGAGCAAGCTTTGCGAGCTTGTCCTTATTTTTCTGATATTTATGTACTGATTGAGATGCTGTCTATTCCTTGTCTTGCTGTTGAAGCTTCTCAAACCTTTGAGAAAGCTGTTGCTCGAGGTGCAATTGGTGCTCAGTCTGTAGCCCTGGTTTTGGAAAGGCGTATCTCACAAAGATTGAATAATAATGCTAGAAATGTTGCTGAAAGTTTGCAGCATTCAGAAGCTTGCACCGTGGGAGATGCCAATGAGCCCTTTGGAGTTCAAAGAGATGATTTTACTTCAGTTCTTGGTCTTGCTGAAACATTGGCACTCTCCAGAGACCCATGTGTGAAGGAATTTGTAAAGTTACTTTATATGATATTGTTTAGATGGTATGCCAATGAATCTTGTCGAGGGAGGATGCTGAAGAGGCTTGTTGACCATGCCACCAGCACTACAGATAATGATCATGAAATAGATTTGGATTTGGATATCTTAGTTACTTTAGTCTGTGAGGAGCAGGAAATTGTCAGACCTGTTTTGAGTATGATGCGTGAAGCTGCTGAACTTGCAAATGTTGATCGGTCTGCTTTATGGCACCAGTTATGTGCTAGTGAAGATGAAATTATTCGTGTTCGTGAAGAAAAGAAAGCTGAGATTTCTAATATGGCTAAGGAAAAAGCTATTGTTACACAGAAGCTGACCGAATCTGAGGCCTCAAACAATCGTCTCAAGTCTGAAATGAGGGCGGAAATGGATCGGTTTGCTCGGGAGAAGAAGGAGCAACTAGAACAAATACAAGAAGTTGAGAGTCAGCTTGAGTGGTTTCGCTCAGAGCGGGATGATGAAATAGCAAAGCTCTCTGCAGAGAAGAAAGCCCTTCAGGACCGTGTGCATGACACAGACACACAACTTTCACAATTAAAGTCCCGGAAACGCGATGAATTAAAGAAAGTAGTCAAGGAGAAAAATGTACTTGCTGAAAGATTGAAGAGTGCTGAAGCTGCACGAAAGAGATTTGATGACGAACTGAAAAGATATGCAACAGAAAATGTGACTCGTGAAGAAATACGAAAATCACTTGAGGATGAAGTTTGTAGATTGACACAGACGGTTGGGCAAACTGAGGAAGAAAAGCGAGAGAAGGAAGAACAGGTTGCTAGGTGTGAAGCATATATTGATGGCATGGAATCAAAATTGCAAGCCTGCCAGCAATATATTCACACACTGGAGGCTTCACTTCAGGAGGAAATGTCACGGCATGCTCCTTTATACGGTGCTGGTCTGGAGACACTATCAATGAAAGAGTTGGAAACACTGTCACGTATCCATGAAGATGGGCTGAGGCAGATCCATGCCCTTCAACAGCGTAAAGGGAGTCCAGCTGGCAGCCCTCTTGTGAGTCCACATGCCCTTCCTCACAACCATCATCCACTATACTCCTCTGCTTCTCCCCCATTGCCTGTGGGACTCCCTCCGTCCCTCATCCCCAATGGGGTTGGTATCCACAGTAACGGCCACATCAACGGTGCAGTTGGACCCTGGTTTAACCACACTTGA 5073 0.4404 MKHSSSEAVPSLSSASSVTDQIHVATSSSSLASPDKPALGSSVAAPEDLAMGTRDGGGAQETVTVERRGEYSAVCRWTVHNFPRIKARALWSKYFEVGGYDCRLLVYPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIANVTDDSKTIHRDSWHRFSSKKKSHGWCDFTPSSTVMDPKLGYLFNNDSVLITADILILNESINFTRDNNELQSSASSSSSMISSSVVAGPASDVLSGKFTWKVHNFSLFKDMIKTQKIMSPVFPAGECNLRISVYQSSVNGVEYLSMCLESKDTDKTVMLSDRSCWCLFRMSVLNQKPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFIGPDSGFLVDDTAVFSTSFHVIKEFSSFSKNGALIAGRSGSGTRKSDGHIGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEVLILKETSVMQDLVDHDSEMSSSGSLTDKNVKRSTFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQAVGSDPDKNFWVKYRMAVVNQKNPAKTVWKESSICTKTWNNSVLQFMKVSDILEADAGFLVRDTVVFVCEILDFCPWFEFSDLEVLASDDDQDALTTDPDELIDSEDSGGISGDEEDIFRNLLSRAGFHLTYGDNPSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPVKVKRLLLPTKLSSSCDGKVTKADESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPSEGSSVADSSNACSKESPDGSGAASPLKRDRENEAAESAQFPVYERLDSVDEESSSTNAVQSSELNGSAIPEKALPGQPICPPETSASVSENASFRSKAKWPEQSEELLGLIVNSLRTLDGAVPQGCPEPRRRPQSAQKISLVLDKAPKHLQADLVALIPKLVEHSEHPLAAYALLERLQKPDAEPALRIPVFGALSQLECGSEVWERILFQSFELLRDSNDEPLAATVDFIFKAASQCQHLPEAVRSVRVRLKNLGLEVSPCVLDFLSKTLNSWGDVAETILRDIDCDDDLGDSCSALSCGLFLFGEHGTAPTGLHVVDEQALRACPYFSDIYVLIEMLSIPCLAVEASQTFEKAVARGAIGAQSVALVLERRISQRLNNNARNVAESLQHSEACTVGDANEPFGVQRDDFTSVLGLAETLALSRDPCVKEFVKLLYMILFRWYANESCRGRMLKRLVDHATSTTDNDHEIDLDLDILVTLVCEEQEIVRPVLSMMREAAELANVDRSALWHQLCASEDEIIRVREEKKAEISNMAKEKAIVTQKLTESEASNNRLKSEMRAEMDRFAREKKEQLEQIQEVESQLEWFRSERDDEIAKLSAEKKALQDRVHDTDTQLSQLKSRKRDELKKVVKEKNVLAERLKSAEAARKRFDDELKRYATENVTREEIRKSLEDEVCRLTQTVGQTEEEKREKEEQVARCEAYIDGMESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLETLSMKELETLSRIHEDGLRQIHALQQRKGSPAGSPLVSPHALPHNHHPLYSSASPPLPVGLPPSLIPNGVGIHSNGHINGAVGPWFNHT 1690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1178 1690 ProSiteProfiles MATH/TRAF domain profile. 411 547 IPR002083 GO:0005515
Bisa09g1178 1690 SUPERFAMILY TRAF domain-like 71 209 - -
Bisa09g1178 1690 CDD MATH 244 376 IPR002083 GO:0005515
Bisa09g1178 1690 MobiDBLite consensus disorder prediction 860 949 - -
Bisa09g1178 1690 Pfam Fanconi anaemia protein FancD2 nuclease 1264 1347 IPR029448 GO:0006281
Bisa09g1178 1690 ProSiteProfiles MATH/TRAF domain profile. 72 202 IPR002083 GO:0005515
Bisa09g1178 1690 Coils Coil 1484 1521 - -
Bisa09g1178 1690 MobiDBLite consensus disorder prediction 911 926 - -
Bisa09g1178 1690 Coils Coil 1543 1563 - -
Bisa09g1178 1690 CDD MATH 412 547 IPR002083 GO:0005515
Bisa09g1178 1690 Pfam MATH domain 81 204 IPR002083 GO:0005515
Bisa09g1178 1690 Pfam MATH domain 592 699 IPR002083 GO:0005515
Bisa09g1178 1690 Pfam MATH domain 443 549 IPR002083 GO:0005515
Bisa09g1178 1690 PANTHER TRAF-LIKE FAMILY PROTEIN 33 1690 - -
Bisa09g1178 1690 SMART math_3 74 182 IPR002083 GO:0005515
Bisa09g1178 1690 SMART math_3 416 528 IPR002083 GO:0005515
Bisa09g1178 1690 SMART math_3 248 361 IPR002083 GO:0005515
Bisa09g1178 1690 SMART math_3 584 684 IPR002083 GO:0005515
Bisa09g1178 1690 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 238 386 IPR008974 GO:0005515
Bisa09g1178 1690 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 566 705 IPR008974 GO:0005515
Bisa09g1178 1690 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 402 556 IPR008974 GO:0005515
Bisa09g1178 1690 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 58 208 IPR008974 GO:0005515
Bisa09g1178 1690 Coils Coil 1405 1482 - -
Bisa09g1178 1690 SUPERFAMILY TRAF domain-like 578 704 - -
Bisa09g1178 1690 SUPERFAMILY TRAF domain-like 412 553 - -
Bisa09g1178 1690 ProSiteProfiles MATH/TRAF domain profile. 243 380 IPR002083 GO:0005515
Bisa09g1178 1690 CDD MATH 581 703 IPR002083 GO:0005515
Bisa09g1178 1690 SUPERFAMILY TRAF domain-like 241 386 - -
Bisa09g1178 1690 MobiDBLite consensus disorder prediction 1626 1655 - -
Bisa09g1178 1690 ProSiteProfiles MATH/TRAF domain profile. 579 703 IPR002083 GO:0005515
Bisa09g1178 1690 MobiDBLite consensus disorder prediction 860 876 - -
Bisa09g1178 1690 CDD MATH 76 202 IPR002083 GO:0005515
Bisa09g1178 1690 MobiDBLite consensus disorder prediction 24 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1178 Bisa-ChrBisa09 17036026 17045827 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1178 09 17036026 17045827 Bisa09g1178 09 17036026 17045827 ECH