Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1021 ATGGCCGACGAAGCTCAGTATTCATCAGGCACAGAGACCACCCCCCACAAGCGCAAGTACGAAGAGCCATCGATCCCACAGTCCGCTACTCATAGGCCCACTGGCTTCTCCGCGCCTATCGCCTCATCATCTCCCGATGGTGCTCACGCGCCACCTCCCTCCTACAACAACGTACCTCCGCCGGCGGCAAGTGGTATCGAGCTTGCCAAACAGCGTGCTCAGGAGGTCGCTGCTCGTCTCTTAAACAATATCAGCAGTGGAGCTGGTGGGCTGGATGCCAAGCGAACTAAGGTTGAGAACGGTGCTACAGGATTTGATTCCAACGATTCGAAGCCTCAGTACTCGATCCCTTCGAGTGCTCCCATTTCTTATGCCTATCAAGGAACTAGCAAAAAGATAGATATCCCTAATGGAAGGGTTGGCGTTATTATTGGTAAAGGGGGGGAGACGATCAAATATCTTCAAACGCAGTCCGGAGCAAAGATCCAAGTTACCCGTGATATGGACGCAGATCCCAATTCTCCAACTAGGATGGTGGAACTCATGGGCACTCCTGATCAAATTGCAGCTGCTGAGAAATTGATTAACGAAGTTCTTTCTGAGGCTGAAGCTGGAGGTTCTGGCATAGTTGCCCGACGATTGACTGGACAAACTGGGTCTGAGCAATTTGTGATGAAAATCCCAAATAATAAGGTTGGTCTTGTGATTGGTAAAGGAGGAGAAACAATAAAGAATATGCAAGCTCAGACTGGAGCCCGAATCCAGGTGATACCATTGCATCTTCCACCAGGTGACACATCAACTGAAAGGACATTACAAGTTGATGGGACCAGCGAACAAATTGAGTCAGCAAAACAGTTGGTCAATCAAGTCATCAGCGAGAATCGTCTTAGAAATTCATCAATGTCTGGTGGTTATCCTCAACAAGGTTACCAAGCCCGACCACCCTCTAGCTGGGTTCCCCCTGGCACTCAAATGCAACAACCTGGCTATGGCTATGTGCAGCCTGGTGCATACTCTGGTCCATCACCCCAGTATAACATGCCTCAGCCACCGTATCCTGGCTATCCTCAATCATCTGGTGGGTATTCTGCCAATTGGGACCAGTCCACAGTTCCACCCCAGCAGTCTACTCATGCTGGTGGTTATGATTATTACAATCAACAGCAACAGCAAAATGCTGGTGGTCCCGCACCCCCGGCTGACGGGACTGCTTACAATTACGGTCAACCACCTTCCTCTGGTTATAACCAACCTGGACAGGGTTATGCTCAAGACAGCTATGGTGGATACAATGCACCACCACAATCAGGGTATGGTCAGCCCCCAACATATGATCAGCACCAAGGCTATGGCTCAGCCCCCAGCTATGGTAGTGGGAGCAACCCATCACAGGAGGGCCACACTCCTAACTATGGATCTCAAGGTGACTCAACCCAAGCTCCTCCAGCCGTCCCAACCCAGCCAGGTTATGGTTCCAGCCAGCAGCCTAGCCCAAACCCTGCTAACTATCCAGCTCAAGGTGCTACTCAGCCAGGTTATGGGATGCCCCCAACATCCCAAGCACCTTATGGTAGTCAACCACAAGTACAGTCTGGTTATGGAACTGGTTATGGACCCCCTCAACCTCAAAAGCCTGGTGGCACCCCTGTTTATGGACAGTCCACACAATCACCTAGCGCAGCAGGAAGCTATGGTCAATCTGGCCCATTGCAACCAGGGTATCCTCCTGCTCAGCCCCCACCTTCTGGCTATGCTCAACCAGAATCTGGTCCCCAAAGAGCACCCCCACCGTATGGTTCTGCAGTGCAACCAGGATATGGTCCCCCACCATATGGTGCTCCTGGTGGTCAGCCTGGTTATAGTCAGGCACCGCCAACATACAACAGCAGTTCTTATGGTGCTGGTTACACTCAGCCTCCAGTATATTCTAGTGATGGTGCACCTGCTCAGGCTGCTCAACAAGGTGGTGTTGCTAAAGCATCGCCTCAAAGTTGA 1998 0.5135 MADEAQYSSGTETTPHKRKYEEPSIPQSATHRPTGFSAPIASSSPDGAHAPPPSYNNVPPPAASGIELAKQRAQEVAARLLNNISSGAGGLDAKRTKVENGATGFDSNDSKPQYSIPSSAPISYAYQGTSKKIDIPNGRVGVIIGKGGETIKYLQTQSGAKIQVTRDMDADPNSPTRMVELMGTPDQIAAAEKLINEVLSEAEAGGSGIVARRLTGQTGSEQFVMKIPNNKVGLVIGKGGETIKNMQAQTGARIQVIPLHLPPGDTSTERTLQVDGTSEQIESAKQLVNQVISENRLRNSSMSGGYPQQGYQARPPSSWVPPGTQMQQPGYGYVQPGAYSGPSPQYNMPQPPYPGYPQSSGGYSANWDQSTVPPQQSTHAGGYDYYNQQQQQNAGGPAPPADGTAYNYGQPPSSGYNQPGQGYAQDSYGGYNAPPQSGYGQPPTYDQHQGYGSAPSYGSGSNPSQEGHTPNYGSQGDSTQAPPAVPTQPGYGSSQQPSPNPANYPAQGATQPGYGMPPTSQAPYGSQPQVQSGYGTGYGPPQPQKPGGTPVYGQSTQSPSAAGSYGQSGPLQPGYPPAQPPPSGYAQPESGPQRAPPPYGSAVQPGYGPPPYGAPGGQPGYSQAPPTYNSSSYGAGYTQPPVYSSDGAPAQAAQQGGVAKASPQS 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1021 665 ProSiteProfiles Type-1 KH domain profile. 128 195 - -
Bisa09g1021 665 MobiDBLite consensus disorder prediction 548 567 - -
Bisa09g1021 665 MobiDBLite consensus disorder prediction 298 331 - -
Bisa09g1021 665 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 216 297 IPR036612 GO:0003723
Bisa09g1021 665 ProSiteProfiles Type-1 KH domain profile. 220 288 - -
Bisa09g1021 665 MobiDBLite consensus disorder prediction 1 66 - -
Bisa09g1021 665 Pfam KH domain 132 197 IPR004088 GO:0003723
Bisa09g1021 665 Pfam KH domain 224 289 IPR004088 GO:0003723
Bisa09g1021 665 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 118 478 - -
Bisa09g1021 665 MobiDBLite consensus disorder prediction 298 665 - -
Bisa09g1021 665 MobiDBLite consensus disorder prediction 622 665 - -
Bisa09g1021 665 MobiDBLite consensus disorder prediction 573 616 - -
Bisa09g1021 665 MobiDBLite consensus disorder prediction 407 538 - -
Bisa09g1021 665 MobiDBLite consensus disorder prediction 27 41 - -
Bisa09g1021 665 FunFam KH domain-containing protein 215 315 - -
Bisa09g1021 665 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 125 205 IPR036612 GO:0003723
Bisa09g1021 665 Gene3D K Homology domain, type 1 124 217 IPR036612 GO:0003723
Bisa09g1021 665 Gene3D K Homology domain, type 1 218 316 IPR036612 GO:0003723
Bisa09g1021 665 SMART kh_6 219 293 IPR004087 GO:0003676
Bisa09g1021 665 SMART kh_6 127 200 IPR004087 GO:0003676
Bisa09g1021 665 MobiDBLite consensus disorder prediction 357 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1021 Bisa-ChrBisa09 14975492 14981045 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1021 09 14975492 14981045 Bisa09g1021 09 14975492 14981045 ECH