Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1003 ATGAAAATGCTGTCTACAAAAGCTAGTCGGGATTGTCATGGCCAGGACTCCTCTTACTTTCTGGGATGGCAAGAGTACGAGAAGAACCCTTATCACTCTATCCATAATCCTTCTGGAATTATTCAGATGGGACTTGCAGAGAATCAGCTTTCCTTCGACATTGTGGAGTCATGGCTTCAAAAAAATCCAGACATAGTGGGGTTGAAGAAAGATGGAGTATCCGTATTTAGGGAACTCGCACTCTTCCAGGATTACCATGGCTTACCCTCTTTCAAAAACGAACTGGTGAAGTTCATGGCCGAAATAAGAGGGAACAGAGTGAAATTTGACTCGGAGAAACTAGTCCTCACAGCTGGTGCTACTTCCGCCAATGAGATTCTCATGTTTTGCCTCGCTGACCCTGGCGAAGCTTTCCTTCTTCCCACTCCTTACTACCCTGGATTTGATAGAGATCTAAAGTGGAGGACAGGTGTTGAAATCGTGCCAATACACTGCTCAAGCTCAAATGGCTTCAGAATTACTTCCTCTGCTTTAGAACAAGCCTATGAACAAGCCCGGAAACTGAATCTAAAGGTCAAAGGGGTGCTAATAACAAACCCCTCCAATCCTCTGGGCACAACCATGACCAAAACCGAGCTTAACCTTCTCATTGATTTTGTCATTGAGAAGAACATCCACATAATAAGCGATGAAATTTATTCAGGGACAGTCTTTGACAATCCCAGGTTCGTAAGCATCATGGAAGTTGCAGAGGAGAAAATCCTGGACGACGCCGCCATTTGGAATCGCATTCACATGGTTTACAGTCTGTCCAAAGACCTCGGCGTGCCGGGGTTTCGAGTCGGCATGATCTACTCCGACAACCACACGGTGGTGGCTACAGCCACCAAAATGTCAAGCTTCGGGTTGGTTTCCTCGCAGACTCAATACTTGCTGGCCAACCTTCTGTCGGACAAGAAATTCACAGAGGAGTACATGAAGGAGACTCAGAGGAGGCTGAAGAAGAGGAAGGAGATGCTTGTGTGTGGGCTGAGAAATGCAGGGATAGGGTGTTTGAAGAGCAACGCAGCGTTGTTCTGCTGGGTGGACATGAGGCATCTGTTAAGGTCTGATAGTTTTGAAGCAGAGAAGGAGCTTTGGAAGAGGATTGTGAGGGAAGTTGGCCTCAACATATCTCCGGGCTCGTCTTGCCATTGCTCTGAAGCAGGGTGGTTCAGGGTTTGCTTTGCCAATATGTCTGAAGACACATTACAAGTTGCTATGCGACGGATAAAGGTCCTTACGGATTCCACTTTCTCTGCTCTCACTGAAACCAAGGCTAATTCTGCATCTGCAAGAAAGTGGATTTCCCAGTTATCATCCTATGACTGGGAACCTTTCTCTTATTTCTGA 1392 0.4648 MKMLSTKASRDCHGQDSSYFLGWQEYEKNPYHSIHNPSGIIQMGLAENQLSFDIVESWLQKNPDIVGLKKDGVSVFRELALFQDYHGLPSFKNELVKFMAEIRGNRVKFDSEKLVLTAGATSANEILMFCLADPGEAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFRITSSALEQAYEQARKLNLKVKGVLITNPSNPLGTTMTKTELNLLIDFVIEKNIHIISDEIYSGTVFDNPRFVSIMEVAEEKILDDAAIWNRIHMVYSLSKDLGVPGFRVGMIYSDNHTVVATATKMSSFGLVSSQTQYLLANLLSDKKFTEEYMKETQRRLKKRKEMLVCGLRNAGIGCLKSNAALFCWVDMRHLLRSDSFEAEKELWKRIVREVGLNISPGSSCHCSEAGWFRVCFANMSEDTLQVAMRRIKVLTDSTFSALTETKANSASARKWISQLSSYDWEPFSYF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1003 463 FunFam 1-aminocyclopropane-1-carboxylate synthase 2 291 423 - -
Bisa09g1003 463 SUPERFAMILY PLP-dependent transferases 3 425 IPR015424 -
Bisa09g1003 463 Gene3D Aspartate Aminotransferase, domain 1 29 423 IPR015422 GO:0003824
Bisa09g1003 463 Pfam Aminotransferase class I and II 41 424 IPR004839 GO:0009058|GO:0030170
Bisa09g1003 463 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 135 156 - -
Bisa09g1003 463 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 295 318 - -
Bisa09g1003 463 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 189 213 - -
Bisa09g1003 463 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 113 133 - -
Bisa09g1003 463 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 263 287 - -
Bisa09g1003 463 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 43 69 - -
Bisa09g1003 463 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 76 92 - -
Bisa09g1003 463 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 225 248 - -
Bisa09g1003 463 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 5 425 - -
Bisa09g1003 463 FunFam 1-aminocyclopropane-1-carboxylate synthase 3 63 318 - -
Bisa09g1003 463 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 269 282 IPR004838 GO:0003824|GO:0009058|GO:0030170
Bisa09g1003 463 CDD AAT_like 77 425 - -
Bisa09g1003 463 Gene3D - 63 318 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1003 Bisa-ChrBisa09 14697354 14699704 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g1003 09 14697354 14699704 Bisa09g1003 09 14697354 14699704 ECH