Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g1000 ATGGGAAAAACGGAGGGCGAGGAAGCTGATCGCAATCAAGGTAATCCGTGGCAGTCAAACAACGAACCCTATGAGGGGAAAGCCGAAGATATGAAGCTTTGGGGAGTTTTCCTCTTTGGCTTAATTGGCGCCACCGCCACTACCCTCGCCGTTGGTCAGCTGCGGAGGACTGTTGATTGGGTTTATACTCAGCTGTCCAGGCCACAGTCATCATGGAAATCAGGTACTGGCAGTTCTTTCCGTTCAGCTTTTCAGGAAGAAGCTTGGAAGAGATACAATAAACGACTGCAAGAGGAATATCAGGAGGAGATGGAGAGAGTGGAACGTATAAAGCGTATGCAAAGTGTGTTTAATAGAGAAAGGAGTAAGTACAAAAGAAGTTACGAAAGCTGGAGGGAAAATGATCCTGGAGCCTATCATCAACAATTCCAAAGAAATGATTGGTATTGGAAGGCAGATGCATCCTTCAGAGACCGCAGGACTAATTATCGAGAAACTCCTAGGGAGAGTGGAAACTATGCACTGTCACATCACTACTCAGTTTTGGGTCTTGACAGGTTTAGAACAGCGCCATACACAGATGCTGAGATTAAGACAGCATTTCGGACCAAGGCGAAGGAGTTTCATCCTGATCAGAACCAGGATAATAGAGAGGCTGCTGAGGCTAAGTTTAAAGAGGTGATGAGTTCGTATGAGGCGATAAAACAAGAAAGAAAGGGCCAGAATCTGTGA 732 0.459 MGKTEGEEADRNQGNPWQSNNEPYEGKAEDMKLWGVFLFGLIGATATTLAVGQLRRTVDWVYTQLSRPQSSWKSGTGSSFRSAFQEEAWKRYNKRLQEEYQEEMERVERIKRMQSVFNRERSKYKRSYESWRENDPGAYHQQFQRNDWYWKADASFRDRRTNYRETPRESGNYALSHHYSVLGLDRFRTAPYTDAEIKTAFRTKAKEFHPDQNQDNREAAEAKFKEVMSSYEAIKQERKGQNL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g1000 243 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 7 240 - -
Bisa09g1000 243 SMART dnaj_3 176 239 IPR001623 -
Bisa09g1000 243 Gene3D DnaJ domain 170 242 IPR036869 -
Bisa09g1000 243 Coils Coil 86 113 - -
Bisa09g1000 243 ProSiteProfiles dnaJ domain profile. 177 239 IPR001623 -
Bisa09g1000 243 Pfam DnaJ domain 178 239 IPR001623 -
Bisa09g1000 243 CDD DnaJ 178 232 IPR001623 -
Bisa09g1000 243 SUPERFAMILY Chaperone J-domain 176 239 IPR036869 -
Bisa09g1000 243 Coils Coil 217 237 - -
Bisa09g1000 243 PRINTS DnaJ domain signature 219 239 IPR001623 -
Bisa09g1000 243 PRINTS DnaJ domain signature 201 216 IPR001623 -
Bisa09g1000 243 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g1000 Bisa-ChrBisa09 14639318 14647287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g1000 178 239 Miscellaneous Gene Families AT5G49580 41.935 7.53e-06 44.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g0111 05 1698701 1700981 Bisa09g1000 09 14639318 14647287 CCT
Bisa09g1000 09 14639318 14647287 Bisa09g1000 09 14639318 14647287 ECH