Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0825 ATGGCGATATGGTCCCCGAAAATCCTCTACGTCCTCCTCCTTCTCTTCACATTCTCAATCTCCTCGCACTCCATCACATTCACCATCACAAACAACTGCACGCGCACCGTATGGCCAGGCACGCTGTCCGGTTCCGGGACGCCGGAGCTCTCGCCGACCGGGTTTCGGTTAGAGCCGGGCAGCAGCATGAAGCTGACGAGCGGTCCGAAGTGGTCGGGGAGGATATGGGGAAGGACCGGATGCCGGTTCGACGGAGAGGGAACTGGGAAGTGTGAAACAGGGGATTGTGGAGGAAAATTGGAATGCAAAGGGAGCGGAGCCGAACCTCCGGCGTCGCTGTTTGAGATAACGCTTGCCGGAGCCGATGGAGAAGACTTCTACGATGTGAGCATGGTGGATGGCTACAATCTGCCGATGCTGGCTGTGCCGAGACGGGTGTATGGTGGCTCTGCGTGTAATTCCACTGGTTGTTTGTCTGATCTCAACGAAGTTTGCCCTAAAGAACTTCAAGTTGTGAGTAATGGAACCCAGGGCAGTGGTGTAGTTGGGTGTAGGAGTGCTTGCGAGGCATTTGGGTCGGATCAGTACTGCTGCAGCGGCCAATTTGCCAACCCAACGACATGTCGCCCCTCCTCTTATTCGTCAATTTTCAAGAAGGCTTGTCCTAGAGCTTACAGCTATGCATACGACGACAAAACCAGCACTTTCACTTGCAAAGCTTATGAATATGACATTATTTTCTGTCCAAGAGGCTATAGGTATTTCTCCCTCTACACTTTGCCATATTCTAATCAAACCTTTCGACCCCAAAACTAA 816 0.5233 MAIWSPKILYVLLLLFTFSISSHSITFTITNNCTRTVWPGTLSGSGTPELSPTGFRLEPGSSMKLTSGPKWSGRIWGRTGCRFDGEGTGKCETGDCGGKLECKGSGAEPPASLFEITLAGADGEDFYDVSMVDGYNLPMLAVPRRVYGGSACNSTGCLSDLNEVCPKELQVVSNGTQGSGVVGCRSACEAFGSDQYCCSGQFANPTTCRPSSYSSIFKKACPRAYSYAYDDKTSTFTCKAYEYDIIFCPRGYRYFSLYTLPYSNQTFRPQN 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0825 271 FunFam THAUMATIN-LIKE PROTEIN 1 25 249 - -
Bisa09g0825 271 CDD TLP-PA 26 248 - -
Bisa09g0825 271 PIRSF PR5 1 268 IPR001938 -
Bisa09g0825 271 ProSitePatterns Thaumatin family signature. 87 102 IPR017949 -
Bisa09g0825 271 ProSiteProfiles Thaumatin family profile. 24 251 IPR001938 -
Bisa09g0825 271 Pfam Thaumatin family 31 249 IPR001938 -
Bisa09g0825 271 SMART tha2 27 249 IPR001938 -
Bisa09g0825 271 SUPERFAMILY Osmotin, thaumatin-like protein 26 250 IPR037176 -
Bisa09g0825 271 PANTHER OS03G0233200 PROTEIN 13 249 IPR001938 -
Bisa09g0825 271 Gene3D Thaumatin 25 249 IPR037176 -
Bisa09g0825 271 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Bisa09g0825 271 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Bisa09g0825 271 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Bisa09g0825 271 PRINTS Pathogenesis-related protein signature 87 116 IPR001938 -
Bisa09g0825 271 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0825 Bisa-ChrBisa09 11932404 11934475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0825 9 249 Receptor kinase-like Gene Family AT5G38280 45.679 1.26e-70 228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0825 09 11932404 11934475 Bisa09g0825 09 11932404 11934475 ECH