Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0191 ATGGCTCCTGCAGCCCTTAGTAAGAAGAAGGCTTTGAAGTCACAGAGAGCTCCACCAAAGAAGAAGCAAAAGAAGAATGAGCTTTTCACTCCAAAGGATGCAAGTGTGAAAGAAATATCTGACCTGTCAGACGGTGAAGATGAGGAGATGGTAAGACACGGAGAGTCTGAAGGAGACGAACCAGAATACGATTCTGGGTCTGCTTCTGAAGTTTCTTCTGACGGGGATAATCCCTTCACTGATGATTTTCTCCAAGGAAGTGATGATGAAGAGAAAGGCTCGGCCTCAGATTCGGGTTCAGGTTCGGATTCTGGTGAAGACGATATTGAAAAAAAGTCAAGAGCCATTGATGAAGAAAGGGCGCGAGAAGAAGAAGACGCAGAGGCTGAAATGCAGCTCAATATTCAAGGAGAATCAGATGAATTTAGACTGCCGACCAAAGAGGAGCTTGAGGAAGAAGCCCTGCGTCCACCTGATCTTCAAAATCTTCAGAGGAGAATGAAAGAGATTGTTCGTGTTCTTTCCAATTTTAAAGCATTGAGGCATGAGGGGTCAACAAGGAAGGATTACGTTGAACAGCTTAAGAAAGATATATGTTCATACTACGGTTACAATGAGTTTCTTATTGGGGCATTAGTGGAGATGTTTCCAGTTGTTGAACTCATGGAACTGATTGAAGCCTTTGAAAAGCCACGGCCTATATGTCTGAGGACTAACACGTTGAAGACACGCAGACGGGATTTGGCAGATGTTTTGATAAACAGAGGAGTAAACCTAGATCCCTTAAGTAAATGGTCAAAAGTCGGATTAGTTGTATATGATTCTCAAGTGCCAATTGGTGCCACTCCTGAGTATATGGCTGGTTTCTATATGCTTCAAAGTGCAAGTTCTTTTCTGCCCGTGATGGCCTTGGCTCCTCAAGAGAAGGAACGTGTTGTTGATATGGCGGCTGCACCTGGTGGTAAAACAACTTATATTGCTGCTCTTATGAAGAATACTGGAATAGTTTTTGCAAATGAAATGAAGGTTCCACGGCTCAAATCACTTACTGCAAATTTGCATCGCATGGGAGTCTCAAACACTGTAGTCTGTAACTATGATGGAAAGGAGCTTCCAAAGGTTTTGGGTCTCAATAGTATTGATAGAGTCCTATTGGATGCCCCTTGCAGTGGTACCGGGGTTATATCCAAAGATGAGTCTGTTAAAACCTCCAAAAATTTGGAAGATATACAGAAATGTGCTCATCTGCAGAAGGAATTGATACTTGCTGCTATTGACATGGTGGATGCTAATTCAAAATCTGGGGGTTACATTGTTTATTCCACATGCTCCATCATGGTTGCTGAGAATGAAGCAGTTATTGACTATGCTCTCAAAAGGAGGGATGTTAAACTGGTGCCTTGTGGACTTGACTTTGGGCGTCCCGGGTTTATAAGGTTTAGGGAACAACGATTTCACCCTTCATTGGAAAAGACAAGGCGTTTCTATCCTCATGTTCACAATTTGGATGGGTTTTTTGTTGCAAAGTTGAAAAAAATGAGCAACTTGAAGCCAAATGCAAAAGCCTTAGAACCGGCAGAACAGGAGGAAGAAGGTGTTAAGCTTGCAAAGGAAAAGGAGAATACAAGCAATGTCCAAAAGCAAGATGCAAATGGCAAAAAGCAAAATGGAAATGGCAAAGAGGTTTCTGCATCCGAATCCAAAAAGAGGAAGAAAAGGCAATTTCCATCGAAGGAGGAAATTTCTAGAGCCAGGGAAGAGAAGAGAAGAGCCTTAAGAGAAAAGAAAGGAAAAAAGGCGGGAACCAACTAG 1812 0.4249 MAPAALSKKKALKSQRAPPKKKQKKNELFTPKDASVKEISDLSDGEDEEMVRHGESEGDEPEYDSGSASEVSSDGDNPFTDDFLQGSDDEEKGSASDSGSGSDSGEDDIEKKSRAIDEERAREEEDAEAEMQLNIQGESDEFRLPTKEELEEEALRPPDLQNLQRRMKEIVRVLSNFKALRHEGSTRKDYVEQLKKDICSYYGYNEFLIGALVEMFPVVELMELIEAFEKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERVVDMAAAPGGKTTYIAALMKNTGIVFANEMKVPRLKSLTANLHRMGVSNTVVCNYDGKELPKVLGLNSIDRVLLDAPCSGTGVISKDESVKTSKNLEDIQKCAHLQKELILAAIDMVDANSKSGGYIVYSTCSIMVAENEAVIDYALKRRDVKLVPCGLDFGRPGFIRFREQRFHPSLEKTRRFYPHVHNLDGFFVAKLKKMSNLKPNAKALEPAEQEEEGVKLAKEKENTSNVQKQDANGKKQNGNGKEVSASESKKRKKRQFPSKEEISRAREEKRRALREKKGKKAGTN 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0191 603 MobiDBLite consensus disorder prediction 545 562 - -
Bisa09g0191 603 FunFam Ribosomal RNA methyltransferase Nop2 191 297 - -
Bisa09g0191 603 MobiDBLite consensus disorder prediction 1 143 - -
Bisa09g0191 603 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 104 515 IPR023267 GO:0001510
Bisa09g0191 603 MobiDBLite consensus disorder prediction 563 603 - -
Bisa09g0191 603 NCBIfam NOL1/NOP2/sun family putative RNA methylase 236 512 IPR011023 GO:0003723|GO:0006396|GO:0008757
Bisa09g0191 603 Pfam 16S rRNA methyltransferase RsmB/F 301 511 IPR001678 GO:0008168
Bisa09g0191 603 MobiDBLite consensus disorder prediction 66 80 - -
Bisa09g0191 603 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 243 256 IPR023273 GO:0008168
Bisa09g0191 603 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 187 207 IPR023273 GO:0008168
Bisa09g0191 603 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 220 232 IPR023273 GO:0008168
Bisa09g0191 603 MobiDBLite consensus disorder prediction 104 129 - -
Bisa09g0191 603 Gene3D Sun protein; domain 3 190 297 - -
Bisa09g0191 603 MobiDBLite consensus disorder prediction 523 544 - -
Bisa09g0191 603 PRINTS RNA (C5-cytosine) methyltransferase signature 284 298 IPR023267 GO:0001510
Bisa09g0191 603 PRINTS RNA (C5-cytosine) methyltransferase signature 313 323 IPR023267 GO:0001510
Bisa09g0191 603 PRINTS RNA (C5-cytosine) methyltransferase signature 381 393 IPR023267 GO:0001510
Bisa09g0191 603 PRINTS RNA (C5-cytosine) methyltransferase signature 435 451 IPR023267 GO:0001510
Bisa09g0191 603 PRINTS RNA (C5-cytosine) methyltransferase signature 495 512 IPR023267 GO:0001510
Bisa09g0191 603 Coils Coil 160 180 - -
Bisa09g0191 603 MobiDBLite consensus disorder prediction 521 603 - -
Bisa09g0191 603 Coils Coil 578 598 - -
Bisa09g0191 603 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 224 513 IPR001678 GO:0008168
Bisa09g0191 603 MobiDBLite consensus disorder prediction 21 60 - -
Bisa09g0191 603 Gene3D Vaccinia Virus protein VP39 300 598 IPR029063 -
Bisa09g0191 603 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 196 512 IPR029063 -
Bisa09g0191 603 Pfam N-terminal domain of 16S rRNA methyltransferase RsmF 220 297 IPR031341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0191 Bisa-ChrBisa09 2431127 2438215 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0191 09 2431127 2438215 Bisa09g0191 09 2431127 2438215 ECH