Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0159 ATGGATGAGGACGAGGGAGGTTACGGTGAGAGTAGGGATCCGATGGATCAGTTCCATCGCAACGAAGCAATATCGGCTGTAGCTGATGACGGCTTCTTGGCCGAGGAAGACGACGATTACGAGGACCTCTACAACGACGTTAATGTCGGAGAAGGGTTTCTTCAATCTCTAAGAAGGAACGAGGATTCAGGGTTTAGGAATGAGGAAGTTGAGGAGAAAAAGACCCAATCGGCCGCCTTACCACCGGAAAGTGGTGGTGTTTCAATTCCAGGTGTCGGTGTCGGTGGCGGAAGTGGCACTGGTGTTGGGGCAGCTGGTGCTGCTGGAGGTGGTGGAGGTGGAGGTGGGGTTATGGATGCTGCATCCAGGGTTCTAGGGAGAGCGGATGGGATTCAAAATCAGGGGTTTAGAGGGAATGATACGGCTGTGAAAGGTAGCGGTGGATCAGGCAGCTCTATGGGTGGTGGAGGTGGGATGAGGGTTGAATTAGGGCAACCACCGGCTAAGTTGGACGAGATAGAAGGGCAGAGTGCTAATAATAGTGTAGGAGCACAAGGGATGGGGCAGCAACCTCATGGTGGAGTTGTTGGGAATATGGGCAGTGTGGGAAATGAAAGTTTGGCGAGACAAGGCGGTGGAGGGGGAAATGTCAATAGGATTGGTGGCAATGGGGTTGGAAATAGTGTGAGTGGTGCCAATATTGTTAATACTGGCGGAGGAGCTGCTGCTGTGGGTGGTGGCAGTGCTGGAAGTACTGGTGGCGGCGGCACCATATTATTTGTGGGTGATTTGCACTGGTGGACTACTGATTCAGAGTTGGAGGCAGAACTTTGTAACTATGGGCCGGTGAAGGAGGTGAAATTTTTTGATGAGAAGGCTAGTGGGAAGTCAAAAGGATATTGCCAGGTTGAATTTTATGAGCCTTCTGCTGCATCTGCTTGTAAGGAAGGGATGAATGGCCATATGTTTAATGGACGGCCATGTGTTGTTGCTTTTGCTTCTCCTTTTACTGTCAAGAGAATGGGAGAGGCACAGGTGAACAGGAATCAACAGATGGCCCAATCTTCACTTTCTCAGGGAAGGAGAGGGGCTGCTGATACGGGGGCTAAGACGGGTGGGAGTAACATTGCTACTGGTGGAAACTACCAAGGTGGAGATGGCAACCGAGGCTATGGGAGAGGTAATTGGGGGAGAGGGAATAATCCTGGGATGGGAAATAGGGGCCCAGTTAATCCAATGAGGAATAGGGGTGGTGGAATGGGTGGTAGAGGTATAATGGGTAATGGTGGGAGTGGATTTGGACAGGGTATTGGTGCTACCCCACCTCAATTGCATCATCAGTCAATGATGAATCAGGGTTTTGATCCTGCATTTGGTGCTCCTATGGGTAGAATGGGTGGCTATGGAGGCTTTCCAGGTGCTCCAACCCCTCCATTCTCTGGGATTTTGCCTTCATTCCCTGGTGTTGGAGGTGTTGGTTTGCCTGGAGTTGCGCCTCATGTTAATCCTGCATTTTTTGGAAGAGGGATGCCTATGAATGGTATGGGAATGATGCCAACATCAGGAGTTGATGGGCCTAATATGGGAATGTGGTCAGATCCAAGTATGGGTGGATGGGGCGGTGACGATCATGGTGGTGGGAGAGTTGGAGAGTCGAGTTATGGGGAGGAAGCTGCATCAGACCATCAGTATGGTGAGGTGAGTCATGATAGAGGTGGTTGGCCTAATGCCATGAGGGAAAAAGATAGAGGATCAGAAAGGGACTGGTCTGGTTCTTCTGAACGGAGGTACAGGGATGACAGAGATCAAAATTATGAGAGAGATGCATCTAGAGAAAAAGATATGGGCCAGGACCAGGAATGGTCTGAACGTAGACATCGTGATGATAGAGAAATAGGCCGTGAGCGAGATAGGGAGCGCGATCGGGAACGGTCTCGAGATCGTGATCGGGAACGGTCTCGAGATCGTGAAAGAGACCGTGAGCGTGACAGGTACAAGGAAGACAGGGACAGATATGCAGACCATCATAGGTACAGAGATCGTGAGGCAGACCATGAGGATGAGTGGGAACGGGGACGGTCATCAAGGACTCACAGCAAGTCACGGTTATCACAGGAGGAGGACCATCATTCTAGATCTAGGGATGCTGATTATGGCAAGAGAAGACGGCTTACCTCTGAGTAA 2184 0.5069 MDEDEGGYGESRDPMDQFHRNEAISAVADDGFLAEEDDDYEDLYNDVNVGEGFLQSLRRNEDSGFRNEEVEEKKTQSAALPPESGGVSIPGVGVGGGSGTGVGAAGAAGGGGGGGGVMDAASRVLGRADGIQNQGFRGNDTAVKGSGGSGSSMGGGGGMRVELGQPPAKLDEIEGQSANNSVGAQGMGQQPHGGVVGNMGSVGNESLARQGGGGGNVNRIGGNGVGNSVSGANIVNTGGGAAAVGGGSAGSTGGGGTILFVGDLHWWTTDSELEAELCNYGPVKEVKFFDEKASGKSKGYCQVEFYEPSAASACKEGMNGHMFNGRPCVVAFASPFTVKRMGEAQVNRNQQMAQSSLSQGRRGAADTGAKTGGSNIATGGNYQGGDGNRGYGRGNWGRGNNPGMGNRGPVNPMRNRGGGMGGRGIMGNGGSGFGQGIGATPPQLHHQSMMNQGFDPAFGAPMGRMGGYGGFPGAPTPPFSGILPSFPGVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSGVDGPNMGMWSDPSMGGWGGDDHGGGRVGESSYGEEAASDHQYGEVSHDRGGWPNAMREKDRGSERDWSGSSERRYRDDRDQNYERDASREKDMGQDQEWSERRHRDDREIGRERDRERDRERSRDRDRERSRDRERDRERDRYKEDRDRYADHHRYRDREADHEDEWERGRSSRTHSKSRLSQEEDHHSRSRDADYGKRRRLTSE 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0159 727 CDD RRM_CFIm68_CFIm59 259 332 - -
Bisa09g0159 727 MobiDBLite consensus disorder prediction 134 148 - -
Bisa09g0159 727 MobiDBLite consensus disorder prediction 55 92 - -
Bisa09g0159 727 MobiDBLite consensus disorder prediction 562 727 - -
Bisa09g0159 727 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 257 335 IPR000504 GO:0003723
Bisa09g0159 727 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 259 328 IPR000504 GO:0003723
Bisa09g0159 727 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR 222 660 IPR034772 -
Bisa09g0159 727 SMART rrm1_1 258 331 IPR000504 GO:0003723
Bisa09g0159 727 MobiDBLite consensus disorder prediction 61 76 - -
Bisa09g0159 727 Gene3D - 251 375 IPR012677 -
Bisa09g0159 727 SUPERFAMILY RNA-binding domain, RBD 255 349 IPR035979 GO:0003676
Bisa09g0159 727 MobiDBLite consensus disorder prediction 352 409 - -
Bisa09g0159 727 MobiDBLite consensus disorder prediction 1 23 - -
Bisa09g0159 727 MobiDBLite consensus disorder prediction 524 727 - -
Bisa09g0159 727 MobiDBLite consensus disorder prediction 131 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0159 Bisa-ChrBisa09 1808653 1810836 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0159 09 1808653 1810836 Bisa09g0159 09 1808653 1810836 ECH