Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0082 ATGAATTTGCCGCTTGTTATACTTAAGTTCAGAAATCAAATAACATTACTGAATAATTGTATCAATGCAAGTTTCAGGTTTTCAGCAATTAGTGGATATAGAAGAATGCTTCCGCAGCATATGAAAAAGACCTTCACTGATAACCCAAAGAAGCTTGCTAACTTGATTGACCTTGTAAATCTTCCATCGACACTTCGAGAGTTTGTGGGCCAATCTCAGATTTCTCACTTTGGTTGTTTTGTGTGTGTTTGGTCCTACATCAAAACCAATAATCTCCAGGATCCAAACAATAAGAATGTGGTGAATTGTGATGAAAAATTGAGAAGTATTTTGTTGGGGAAATCTCGGGTGGAGCTGGCAGAACTTCCTGAACTTATCAAGCTGCATTTTCCAAAAGCGCCTAAGTAA 408 0.375 MNLPLVILKFRNQITLLNNCINASFRFSAISGYRRMLPQHMKKTFTDNPKKLANLIDLVNLPSTLREFVGQSQISHFGCFVCVWSYIKTNNLQDPNNKNVVNCDEKLRSILLGKSRVELAELPELIKLHFPKAPK 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0082 135 SUPERFAMILY SWIB/MDM2 domain 51 133 IPR036885 -
Bisa09g0082 135 Gene3D SWIB/MDM2 domain 53 135 IPR036885 -
Bisa09g0082 135 ProSiteProfiles SWIB/MDM2 domain profile. 54 132 IPR003121 -
Bisa09g0082 135 CDD SWIB-MDM2_like 59 130 - -
Bisa09g0082 135 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 40 135 - -
Bisa09g0082 135 Pfam SWIB/MDM2 domain 59 130 IPR003121 -
Bisa09g0082 135 SMART swib_2 55 135 IPR019835 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0082 Bisa-ChrBisa09 922171 923641 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Bisa09g0082 SWIB 1.5e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0082 09 922171 923641 Bisa09g0082 09 922171 923641 ECH