Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2680 ATGGAATGCTGTATTGTTGAGAAGCTCAAAACCCAGCCTTTCTGGGTTGCTTTGCTTTTCGCTTTGGGTTCTTTCTCCATCCTGAAATTTTCTGTGTTTTTTCTGAGATGGGTCTATGTCAATTTCCTCAGGCCCTCCAAAAATCTCAAGAAGTACGGATCTTGGGCACTCGTTACTGGACCCACTGACGGTATCGGCAAGGGTTTTGCGTTTGAGTTGGCTCGTAAAGGGCTTAATCTGATTTTGGTGGGTCGAAATCCCAATAAGCTGAAAGATGTTTCCGATGCGATTCTCGCTAAGTACGGGAAAACCCAGATTAAGACGGTTGTCGTTGATTTTACTGGCGATCTTTCCCTGGGTATGCTAAGTATTCGTGAAGCTATTGAAGGATTGGATGTGGGGGTTCTGATCAATAACGTGGGAATCTCGTATCCTTACGCGAGATACTTCCATGAAGTGGATGAGGAGCTCTTGAAGAATCTGATTAAAGTGAATGTGGAAGGAACTACCAAGGTTACACAGGCTGTTCTTCCCGGTATGCTTCAGAGAAAGAAAGGAGCAATCGTCAACATTGGTTCTGGAGCTGCGATTGTGATTCCTTCGGATCCTCTTTATGCTGTATATGCCGCCACAAAAGCGTACATAGATCAATTCTCGAGATGTCTCTACGTGGAATACAAGAAAAGTGGAATTGACGTTCAGTGTCAGGTCCCATTATATGTGGCAACGAAAATGGCATCCATAAGGAGATCTTCATTCTTTGTTCCATCAACAAATGGATATGCAAGAGCCGGCGTGCGTTGTATAGGGTACGAGCCTCGCTGCACGCCTTACTGGCCGCATACCATTCTGTGGGCTTTGGCTAAATCTTTGCCGGAGTCTGTTGTCGATTCATGGCGCCTCGGTTTCTGCCTGAGCATTCGAAGGAGGGGGCAGCGCAAGGACAACACGAAGAAGGAGCAATAG 966 0.4627 MECCIVEKLKTQPFWVALLFALGSFSILKFSVFFLRWVYVNFLRPSKNLKKYGSWALVTGPTDGIGKGFAFELARKGLNLILVGRNPNKLKDVSDAILAKYGKTQIKTVVVDFTGDLSLGMLSIREAIEGLDVGVLINNVGISYPYARYFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLQRKKGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRRSSFFVPSTNGYARAGVRCIGYEPRCTPYWPHTILWALAKSLPESVVDSWRLGFCLSIRRRGQRKDNTKKEQ 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2680 321 Gene3D - 48 266 - -
Bisa08g2680 321 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 142 IPR002347 -
Bisa08g2680 321 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 186 194 IPR002347 -
Bisa08g2680 321 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 208 227 IPR002347 -
Bisa08g2680 321 PANTHER RH59310P 14 319 - -
Bisa08g2680 321 Pfam short chain dehydrogenase 55 247 IPR002347 -
Bisa08g2680 321 PRINTS Glucose/ribitol dehydrogenase family signature 131 142 IPR002347 -
Bisa08g2680 321 PRINTS Glucose/ribitol dehydrogenase family signature 55 72 IPR002347 -
Bisa08g2680 321 PRINTS Glucose/ribitol dehydrogenase family signature 180 196 IPR002347 -
Bisa08g2680 321 PRINTS Glucose/ribitol dehydrogenase family signature 208 227 IPR002347 -
Bisa08g2680 321 PRINTS Glucose/ribitol dehydrogenase family signature 229 246 IPR002347 -
Bisa08g2680 321 CDD 17beta-HSD1_like_SDR_c 53 295 - -
Bisa08g2680 321 PIRSF 11-beta-HSD1 5 314 - -
Bisa08g2680 321 FunFam very-long-chain 3-oxoacyl-CoA reductase 1 49 277 - -
Bisa08g2680 321 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 52 291 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2680 Bisa-ChrBisa08 62031647 62033754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2680 1 320 Lipid Metabolism Gene Families AT1G67730 66.875 4.19e-166 463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2680 08 62031647 62033754 Bisa08g2680 08 62031647 62033754 CCT
Bisa08g2680 08 62031647 62033754 Bisa08g2680 08 62031647 62033754 ECH